RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 TRHRP34981 398 aaPredicted RBP13.13□□□□□ -0.31
COMMD3-202ENST00000444869 MLF1P58340 268 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 OR1C1Q15619 314 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 ELAVL1Q15717 326 aaKnown RBP13.13□□□□□ -0.31
COMMD3-202ENST00000444869 ADGRD1Q6QNK2 874 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 TIFABQ6ZNK6 161 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 RNF175Q8N4F7 328 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 TMEM151AQ8N4L1 468 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 DNAJB8Q8NHS0 232 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 WDR20Q8TBZ3 569 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
COMMD3-202ENST00000444869 MRPL46Q9H2W6 279 aaKnown RBP13.13□□□□□ -0.31
COMMD3-202ENST00000444869 OR51B5Q9H339 312 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 CDCP1Q9H5V8 836 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 PCTPQ9UKL6 214 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 SLC5A6Q9Y289 635 aa13.13□□□□□ -0.31
COMMD3-202ENST00000444869 ASPDHA6ND91 283 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 PLPP1O14494 284 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 OR7A17O14581 309 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 CRYABP02511 175 aaKnown RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 RPS17P08708 135 aaKnown RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 SSR2P43308 183 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 CLCN2P51788 898 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 IGLV3-21P80748 117 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 TRAF3Q13114 568 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 CUL3Q13618 768 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 DDX39BQ13838 428 aaKnown RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 ZNF468Q5VIY5 522 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 OR4C11Q6IEV9 310 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 CLNKQ7Z7G1 428 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 ZNF227Q86WZ6 799 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 MYLK4Q86YV6 388 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 ZCCHC7Q8N3Z6 543 aaKnown RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 RGMAQ96B86 450 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 REPS1Q96D71 796 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 VMP1Q96GC9 406 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 MTERF1Q99551 399 aaKnown RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 MRPL57Q9BQC6 102 aaKnown RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 NTMT1Q9BV86 223 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 HES7Q9BYE0 225 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 DEFB126Q9BYW3 111 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 EPB41L4BQ9H329 900 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
COMMD3-202ENST00000444869 ANKRD10Q9NXR5 420 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 FETUBQ9UGM5 382 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
COMMD3-202ENST00000444869 TRBV11-1A0A0K0K1C0 115 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 FOXE1O00358 373 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 SAP18O00422 153 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 SH3BGRLO75368 114 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 CLDN9O95484 217 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 STSP08842 583 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 RHOXF2BP0C7M4 288 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 MST1P26927 711 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 ST13P50502 369 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 RPS13P62277 151 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 PHEXP78562 749 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 PMP22Q01453 160 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 SERTAD2Q14140 314 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 ZRSR2Q15696 482 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 CPSF6Q16630 551 aaKnown RBP eCLIP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 C4orf17Q53FE4 359 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 SPINK14Q6IE38 97 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 MRM1Q6IN84 353 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 LCA5Q86VQ0 697 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 TMEM132CQ8N3T6 1108 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 HORMAD2Q8N7B1 307 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 EIF1ADQ8N9N8 165 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 TMEM178AQ8NBL3 297 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 OR52B6Q8NGF0 335 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 PTPMT1Q8WUK0 201 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 NCLNQ969V3 563 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 ANKRD9Q96BM1 317 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 MTBPQ96DY7 904 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 PHF21BQ96EK2 531 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 SCYL1Q96KG9 808 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 FRMD6Q96NE9 622 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 NSUN5Q96P11 429 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 CENPKQ9BS16 269 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 SORBS1Q9BX66 1292 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 C1QTNF3Q9BXJ4 246 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 NOL11Q9H8H0 719 aaKnown RBP13.11□□□□□ -0.31
COMMD3-202ENST00000444869 L2HGDHQ9H9P8 463 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 SPACA6W5XKT8 324 aa13.11□□□□□ -0.31
COMMD3-202ENST00000444869 MAST4O15021 2626 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms