RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 UQCRC2P22695 453 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 PRDX3P30048 256 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ATP4BP51164 291 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 GPLD1P80108 840 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ZNF630Q2M218 657 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 TECPR1Q7Z6L1 1165 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 C8orf59Q8N0T1 100 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 ARL10Q8N8L6 244 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 C19orf47Q8N9M1 422 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 FAM156AQ8NDB6 213 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 KAT2AQ92830 837 aa13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 PAIP1Q9H074 479 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 RP1L1Q8IWN7 2480 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-204ENST00000444061 HYKKA2RU49 373 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 FZD6O60353 706 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 FOXD2O60548 495 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 CBFA2T3O75081 653 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 KRT36O76013 467 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 ABHD18Q0P651 414 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 DEPDC1Q5TB30 811 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 NDUFAF5Q5TEU4 345 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 PHTF2Q8N3S3 785 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 LILRA3Q8N6C8 439 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 PJA1Q8NG27 643 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 MRGPRX3Q96LB0 322 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 Q96MT0 163 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 KCNK13Q9HB14 408 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 DMRT3Q9NQL9 472 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 C1GALT1Q9NS00 363 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 CUEDC1Q9NWM3 386 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 GNB5O14775 395 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 KLHL18O94889 574 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 DLGAP3O95886 979 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 CERS1P27544 350 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 GSTM5P46439 218 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 CDH12P55289 794 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 PLCXD2Q0VAA5 305 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 RNF130Q86XS8 419 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 EPHX4Q8IUS5 362 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 NUP43Q8NFH3 380 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 SLC22A8Q8TCC7 542 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 ECHDC3Q96DC8 303 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 DEPDC7Q96QD5 511 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 PLGRKTQ9HBL7 147 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 MKKSQ9NPJ1 570 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 KLF15Q9UIH9 416 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 ZFR2Q9UPR6 939 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 R4GN57 208 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 hCG_2039718K7EN88 272 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 TLX3O43711 291 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 SLCO2B1O94956 709 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 PLGP00747 810 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 ACADLP28330 430 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 GABRA3P34903 492 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 CCDC80Q76M96 950 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 KRTCAP2Q8N6L1 136 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 RAB8BQ92930 207 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 MEAF6Q9HAF1 191 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 BRF2Q9HAW0 419 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 ZNF304Q9HCX3 659 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 FGF21Q9NSA1 209 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 CLN6Q9NWW5 311 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 FAM53CQ9NYF3 392 aa13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 PDP1Q9P0J1 537 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-204ENST00000444061 TLCD2A6NGC4 264 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 M0QX08 132 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 MYL12BO14950 172 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 LINGO3P0C6S8 592 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 XCR1P46094 333 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 HSD11B2P80365 405 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 KLHL12Q53G59 568 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 KANK2Q63ZY3 851 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 HIPK1Q86Z02 1210 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 TSPEARQ8WU66 669 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 ALG14Q96F25 216 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 ZNF317Q96PQ6 595 aaPredicted RBP13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 DHRS4Q9BTZ2 278 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 TBC1D29Q9UFV1 150 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 TESMINQ9Y4I5 508 aa13.46□□□□□ -0.26
SMARCA4-204ENST00000444061 E7ENX8 843 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 G3V2T6 193 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 SGK494L7N484 410 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 C9P02748 559 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 MT-ND1P03886 318 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 IMPA1P29218 277 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 TAP2Q03519 686 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 CAMK1Q14012 370 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 NNATQ16517 81 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 NLRP8Q86W28 1048 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 ZDHHC21Q8IVQ6 265 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 C16orf78Q8WTQ4 265 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 GABRG3Q99928 467 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 NTMT1Q9BV86 223 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 ULBP3Q9BZM4 244 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 AIG1Q9NVV5 245 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 YY2O15391 372 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms