RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 MED27Q6P2C8 311 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 ARHGAP11AQ6P4F7 1023 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 C3P1Q6ZMU1 363 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 CHSY3Q70JA7 882 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 ZNF227Q86WZ6 799 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 DOLPP1Q86YN1 238 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 PPM1NQ8N819 430 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 PSD4Q8NDX1 1056 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 SPATA4Q8NEY3 305 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 OR5L2Q8NGL0 311 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 FAM57AQ8TBR7 257 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 CHTF18Q8WVB6 975 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 F2RL3Q96RI0 385 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 CSF3RQ99062 836 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 ALOXE3Q9BYJ1 711 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 CD244Q9BZW8 370 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 OR8D2Q9GZM6 311 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 ALG9Q9H6U8 611 aa10.96□□□□□ -0.65
TTC28-203ENST00000442232 PTBP2Q9UKA9 531 aaKnown RBP10.96□□□□□ -0.65
TTC28-203ENST00000442232 A0A1B0GTH9 108 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 SYCE1LA8MT33 242 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 C17orf105B2RV13 164 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 CYR61O00622 381 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 OR2J2O76002 312 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 WISP3O95389 354 aaPredicted RBP10.95□□□□□ -0.66
TTC28-203ENST00000442232 CPN2P22792 545 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 SSTR2P30874 369 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 CASQ1P31415 396 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 PLTPP55058 493 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 KBTBD12Q3ZCT8 623 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 ADNP2Q6IQ32 1131 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 IL20RBQ6UXL0 311 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 GK5Q6ZS86 529 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 CYS1Q717R9 158 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 MDGA2Q7Z553 956 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 VN1R5Q7Z5H4 357 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 SLC22A16Q86VW1 577 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 MYLK4Q86YV6 388 aaPredicted RBP10.95□□□□□ -0.66
TTC28-203ENST00000442232 ZFP62Q8NB50 900 aaPredicted RBP10.95□□□□□ -0.66
TTC28-203ENST00000442232 TMEM52Q8NDY8 209 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 C16orf52Q8NHV5 167 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 ASB5Q8WWX0 329 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 ESAMQ96AP7 390 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 SDCCAG3Q96C92 435 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 ART5Q96L15 291 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 MS4A8Q9BY19 250 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 TP63Q9H3D4 680 aaPredicted RBP10.95□□□□□ -0.66
TTC28-203ENST00000442232 MYOTQ9UBF9 498 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 ADGRE2Q9UHX3 823 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 ZNF223Q9UK11 482 aaPredicted RBP10.95□□□□□ -0.66
TTC28-203ENST00000442232 ZNF490Q9ULM2 529 aaPredicted RBP10.95□□□□□ -0.66
TTC28-203ENST00000442232 PYCARDQ9ULZ3 195 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 ASB1Q9Y576 335 aa10.95□□□□□ -0.66
TTC28-203ENST00000442232 TGFBR3LH3BV60 316 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 K7EPI3 171 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 WWP2O00308 870 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 ZNHIT1O43257 154 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 KERAO60938 352 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 SH3BGRLO75368 114 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 PDE9AO76083 593 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 LTA4HP09960 611 aaKnown RBP10.94□□□□□ -0.66
TTC28-203ENST00000442232 EPB42P16452 691 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 HIST1H1TP22492 207 aaPredicted RBP10.94□□□□□ -0.66
TTC28-203ENST00000442232 ATP5A1P25705 553 aaKnown RBP10.94□□□□□ -0.66
TTC28-203ENST00000442232 TLX1P31314 330 aaPredicted RBP10.94□□□□□ -0.66
TTC28-203ENST00000442232 SOX3P41225 446 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 CASP2P42575 452 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 GPR143P51810 404 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 PPIAP62937 165 aaKnown RBP10.94□□□□□ -0.66
TTC28-203ENST00000442232 PLIN5Q00G26 463 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 DDX39BQ13838 428 aaKnown RBP10.94□□□□□ -0.66
TTC28-203ENST00000442232 FAM83EQ2M2I3 478 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 CMPK2Q5EBM0 449 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 OPN5Q6U736 354 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 RTL4Q6ZR62 310 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 RGS9BPQ6ZS82 235 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 NCCRP1Q6ZVX7 275 aaPredicted RBP10.94□□□□□ -0.66
TTC28-203ENST00000442232 CCDC91Q7Z6B0 441 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 CMC1Q7Z7K0 106 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 ACOT4Q8N9L9 421 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 OR2M7Q8NG81 312 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 OR8K3Q8NH51 312 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 SLC2A12Q8TD20 617 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 UBTD2Q8WUN7 234 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 SREK1Q8WXA9 508 aaKnown RBP10.94□□□□□ -0.66
TTC28-203ENST00000442232 REPS1Q96D71 796 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 CMTM7Q96FZ5 175 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 UBXN10Q96LJ8 280 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 LURAP1Q96LR2 239 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 DGAT2Q96PD7 388 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 RASL10BQ96S79 203 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 DMRTA2Q96SC8 542 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 MAPKAP1Q9BPZ7 522 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.94□□□□□ -0.66
TTC28-203ENST00000442232 MS4A12Q9NXJ0 267 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 GRHL1Q9NZI5 618 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 VTI1BQ9UEU0 232 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 PHF11Q9UIL8 331 aa10.94□□□□□ -0.66
TTC28-203ENST00000442232 A0A087X1B8 175 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms