RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 COG4Q9H9E3 785 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 SIDT1Q9NXL6 827 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 ING1Q9UK53 422 aaPredicted RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 SUFUQ9UMX1 484 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 KCNK6Q9Y257 313 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 FARSAQ9Y285 508 aaKnown RBP4.55□□□□□ -1.68
PTPN4-206ENST00000441089 DNAJC16Q9Y2G8 782 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 WDR37Q9Y2I8 494 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 NUP210LQ5VU65 1888 aa4.55□□□□□ -1.68
PTPN4-206ENST00000441089 C17orf113A0A1B0GUU1 675 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ARHGEF33A8MVX0 844 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 GPR89AB7ZAQ6 455 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 C19orf84I3L1E1 186 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 GFYI3L273 518 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 EIF3FO00303 357 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 QSOX1O00391 747 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 LIN7AO14910 233 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 SMAD7O15105 426 aaKnown RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 KMOO15229 486 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 PPM1DO15297 605 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 BIRC5O15392 142 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 TOX3O15405 576 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 TAPBPO15533 448 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ITM2AO43736 263 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 KERAO60938 352 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 LYPLA1O75608 230 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 SIX3O95343 332 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 MATN4O95460 622 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 EML2O95834 649 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 PLATP00750 562 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 IGHEP01854 428 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 APOA4P06727 396 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 THBDP07204 575 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 RBP1P09455 135 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 GPR89BP0CG08 455 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 TPBGLP0DKB5 382 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 CBSLP0DN79 551 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 MYL2P10916 166 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ENO3P13929 434 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 DRD4P21917 467 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ATP5F1P24539 256 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 DNASE1P24855 282 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 AK4P27144 223 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ACADLP28330 430 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 PCSK6P29122 969 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 LSP1P33241 339 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 CBSP35520 551 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 CA7P43166 264 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 GNPDA1P46926 289 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 FASLGP48023 281 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 RGS4P49798 205 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 AGTR2P50052 363 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 PRKAA2P54646 552 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 RPS18P62269 152 aaKnown RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 DMPKQ09013 629 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 BST1Q10588 318 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ABRQ12979 859 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 IL10RAQ13651 578 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 GRB7Q14451 532 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 TGFBIQ15582 683 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 CHI3L2Q15782 390 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 FAM83EQ2M2I3 478 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 TTLL9Q3SXZ7 439 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 SYTL3Q4VX76 610 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 UNC50Q53HI1 259 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 METRNLQ641Q3 311 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 DUS1LQ6P1R4 473 aaKnown RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 MBOAT1Q6ZNC8 495 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 RGS9BPQ6ZS82 235 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 NEK10Q6ZWH5 1172 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 CHST15Q7LFX5 561 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 CCDC91Q7Z6B0 441 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 TAX1BP1Q86VP1 789 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 AMZ2Q86W34 360 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 PPP1R3BQ86XI6 285 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 GALNT13Q8IUC8 556 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 PLXDC1Q8IUK5 500 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 NUDCD3Q8IVD9 361 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 CFAP206Q8IYR0 622 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 LRRC34Q8IZ02 419 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 SLC22A15Q8IZD6 547 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 MYO1HQ8N1T3 1032 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 BCORP1Q8N888 145 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 PTGR2Q8N8N7 351 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 LMNTD1Q8N9Z9 388 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 RHEBL1Q8TAI7 183 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 STAG3L4Q8TBR4 150 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 RDH11Q8TC12 318 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ADAMTS17Q8TE56 1095 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 NCSTNQ92542 709 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ZNF75CPQ92670 426 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ESAMQ96AP7 390 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 PHF21BQ96EK2 531 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 ZNF514Q96K75 400 aaPredicted RBP4.54□□□□□ -1.68
PTPN4-206ENST00000441089 MAGEB18Q96M61 343 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 IP6K3Q96PC2 410 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 FCRL4Q96PJ5 515 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 TMEM237Q96Q45 408 aa4.54□□□□□ -1.68
PTPN4-206ENST00000441089 OR2M4Q96R27 311 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms