RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CCDC149Q6ZUS6 474 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 PDZD3Q86UT5 571 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 MARCH9Q86YJ5 346 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 C7orf34Q96L11 122 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 LRR1Q96L50 414 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 MCCC1Q96RQ3 725 aaPredicted RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 PKMYT1Q99640 499 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 FNDC11Q9BVV2 318 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 GABARAPL3Q9BY60 117 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 SERHL2Q9H4I8 314 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 C3orf14Q9HBI5 128 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 ZDHHC3Q9NYG2 299 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 H2AFY2Q9P0M6 372 aaPredicted RBP8.67□□□□□ -1.02
COPB1-202ENST00000439561 DYRK1BQ9Y463 629 aa8.67□□□□□ -1.02
COPB1-202ENST00000439561 TRBV4-1A0A0J9YWV2 114 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 ERVH48-1M5A8F1 160 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 YY2O15391 372 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 SEPT4O43236 478 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 HPGDSO60760 199 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 C8GP07360 202 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 JUPP14923 745 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 IL1RNP18510 177 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 PTX3P26022 381 aaPredicted RBP8.66□□□□□ -1.02
COPB1-202ENST00000439561 BUD31P41223 144 aaPredicted RBP8.66□□□□□ -1.02
COPB1-202ENST00000439561 MANFP55145 182 aaKnown RBP8.66□□□□□ -1.02
COPB1-202ENST00000439561 ZNF91Q05481 1191 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 RING1Q06587 406 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 LRRC32Q14392 662 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 FAM110CQ1W6H9 321 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 LYPLAL1Q5VWZ2 237 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 KIAA1161Q6NSJ0 714 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 OTOP2Q7RTS6 562 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 ABI3BPQ7Z7G0 1075 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 SLC38A6Q8IZM9 456 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 ZNF431Q8TF32 576 aaPredicted RBP8.66□□□□□ -1.02
COPB1-202ENST00000439561 TP53INP1Q96A56 240 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 TADA1Q96BN2 335 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 TBX5Q99593 518 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 BARHL1Q9BZE3 327 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 SRRQ9GZT4 340 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 LINC00597Q9H2U6 94 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 HHATLQ9HCP6 504 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 GULP1Q9UBP9 304 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 TMPRSS11EQ9UL52 423 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 SNX11Q9Y5W9 270 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 A0A0G2JN53 185 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 CSF3P09919 207 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 SRCP12931 536 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 CELP19835 753 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 CR2P20023 1033 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 PCGF2P35227 344 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 KIR2DL3P43628 341 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 MLLT1Q03111 559 aaPredicted RBP8.66□□□□□ -1.02
COPB1-202ENST00000439561 CRB2Q5IJ48 1285 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 AGTRAPQ6RW13 159 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 TRMT11Q7Z4G4 463 aaKnown RBP8.66□□□□□ -1.02
COPB1-202ENST00000439561 APCDD1Q8J025 514 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 HUS1BQ8NHY5 278 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 CHAC2Q8WUX2 184 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 UFD1Q92890 307 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 MED30Q96HR3 178 aa8.66□□□□□ -1.02
COPB1-202ENST00000439561 SDHCQ99643 169 aaPredicted RBP8.66□□□□□ -1.02
COPB1-202ENST00000439561 NDRG2Q9UN36 371 aaKnown RBP8.66□□□□□ -1.02
COPB1-202ENST00000439561 C2orf92A0A1B0GVN3 265 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 NPIPB15A6NHN6 443 aaPredicted RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 CD8B2A6NJW9 211 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 LYRM1O43325 122 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 SSNA1O43805 119 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 STC2O76061 302 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ZNF865P0CJ78 1059 aaPredicted RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 NR2F1P10589 423 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 CD8BP10966 210 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ACVR2AP27037 513 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 SLC9A3P48764 834 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 STK19P49842 368 aaPredicted RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 DSTNP60981 165 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 AP1S1P61966 158 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 RPS7P62081 194 aaKnown RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 FGFBP1Q14512 234 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 GINS1Q14691 196 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 SLC5A12Q1EHB4 618 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 BCL2L15Q5TBC7 163 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ANKRD54Q6NXT1 300 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 XKRXQ6PP77 449 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 NATD1Q8N6N6 113 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 OR52P1PQ8NH57 321 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ASZ1Q8WWH4 475 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 FATE1Q969F0 183 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 EXOSC8Q96B26 276 aaKnown RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 C11orf24Q96F05 449 aaPredicted RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 YIPF4Q9BSR8 244 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 PLCXD1Q9NUJ7 323 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 TXNL4BQ9NX01 149 aaKnown RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 C5AR2Q9P296 337 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 OR6C75A6NL08 312 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ZNF780AO75290 641 aaPredicted RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 SCG5P05408 212 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 H1F0P07305 194 aaKnown RBP8.65□□□□□ -1.02
COPB1-202ENST00000439561 ASGR1P07306 291 aa8.65□□□□□ -1.02
COPB1-202ENST00000439561 ATXN8OSP0DMR3 200 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms