RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RAP1GDS1P52306 607 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ARFIP1P53367 373 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 CLDN8P56748 225 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 RAB8AP61006 207 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 STXBP1P61764 594 aaKnown RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 IRX1P78414 480 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ZFP36L1Q07352 338 aaKnown RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 RGS1Q08116 209 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 BNIP1Q12981 228 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 MAP7Q14244 749 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 PTGR1Q14914 329 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 RPS6KA2Q15349 733 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 GPR19Q15760 415 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ZSCAN26Q16670 478 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 C21orf62-AS1Q17RA5 79 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 AGKQ53H12 422 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 FAM209AQ5JX71 171 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 WASHC2DQ5SRD0 308 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 MANEAQ5SRI9 462 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 OR4C11Q6IEV9 310 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 POMZP3Q6PJE2 187 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 LYPD4Q6UWN0 246 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ZNF793Q6ZN11 406 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 RIMKLAQ8IXN7 391 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 CAMKVQ8NCB2 501 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 BVESQ8NE79 360 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 OR2L5Q8NG80 312 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 PROKR1Q8TCW9 393 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 RERGQ96A58 199 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 RCC1LQ96I51 464 aaKnown RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 QRFPRQ96P65 431 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 TSSK3Q96PN8 268 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 GFM1Q96RP9 751 aaKnown RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 DPYSL5Q9BPU6 564 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 C17orf62Q9BQA9 187 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 SPRTNQ9H040 489 aaPredicted RBP6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 SYNDIG1Q9H7V2 258 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 SOHLH2Q9NX45 425 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 AHSPQ9NZD4 102 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ZIM2Q9NZV7 527 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 CCDC167Q9P0B6 97 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 MCM8Q9UJA3 840 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 ADAM29Q9UKF5 820 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 CAPN7Q9Y6W3 813 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 CEP192Q8TEP8 1941 aa6.67□□□□□ -1.34
LSM3P3-201ENST00000436601 LOC100653049A0A140TA62 436 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 HYKKA2RU49 373 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 FAM234BA2RU67 622 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 FITM1A5D6W6 292 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 D6RAR5 112 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 ZSCAN9O15535 394 aaPredicted RBP6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC22A3O75751 556 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 KRT34O76011 436 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 SCELO95171 688 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 SLC35G6P0C7Q6 338 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 MSL3P1P0C860 447 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 COX4I1P13073 169 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 CD247P20963 164 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 HIST1H1TP22492 207 aaPredicted RBP6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 JAK1P23458 1154 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 ATP5A1P25705 553 aaKnown RBP6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 PRDX6P30041 224 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 PDX1P52945 283 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 C21orf58P58505 322 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 STX1BP61266 288 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 BTN3A2P78410 334 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 NHLH1Q02575 133 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 SLAMF1Q13291 335 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 RUNX2Q13950 521 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 HERC3Q15034 1050 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 DEFB134Q4QY38 66 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 CCNYL2Q5T2Q4 361 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 FAM71E1Q6IPT2 247 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 TRIM40Q6P9F5 258 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 PRSS41Q7RTY9 318 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 B3GNT8Q7Z7M8 397 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 NUDT13Q86X67 352 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 SNX32Q86XE0 403 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 PDSS2Q86YH6 399 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 SHISA5Q8N114 240 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 ZCCHC7Q8N3Z6 543 aaKnown RBP6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 KRTCAP2Q8N6L1 136 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 POU5F2Q8N7G0 328 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 ACOT4Q8N9L9 421 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 RCBTB1Q8NDN9 531 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 SRFBP1Q8NEF9 429 aaKnown RBP6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 OR8K5Q8NH50 307 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 OR1L3Q8NH93 324 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 CLHC1Q8NHS4 586 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 ZCCHC10Q8TBK6 192 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 C16orf78Q8WTQ4 265 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 PPP1R14AQ96A00 147 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 TM4SF18Q96CE8 201 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 ZNF501Q96CX3 271 aaPredicted RBP6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 NSL1Q96IY1 281 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 C10orf90Q96M02 699 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 KCNC2Q96PR1 638 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 CENPKQ9BS16 269 aa6.66□□□□□ -1.34
LSM3P3-201ENST00000436601 TBCDQ9BTW9 1192 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms