RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TXNDC16Q9P2K2 825 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 ODF2LQ9ULJ1 636 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 PCDHGA1Q9Y5H4 931 aa2.5□□□□□ -2.01
PTPN4-205ENST00000433888 GPRASP1Q5JY77 1395 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 ACEP12821 1306 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 RNF123Q5XPI4 1314 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 GTPBP10A4D1E9 387 aaKnown RBP2.49□□□□□ -2.01
PTPN4-205ENST00000433888 HTR3EA5X5Y0 456 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 C17orf105B2RV13 164 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 CTDSPLO15194 276 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 WDR46O15213 610 aaKnown RBP2.49□□□□□ -2.01
PTPN4-205ENST00000433888 ZNF253O75346 499 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 STAM2O75886 525 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 REC8O95072 547 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 RLN1P04808 185 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 SERPING1P05155 500 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 HCKP08631 526 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 SBK2P0C263 348 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 UMPSP11172 480 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 ADRA2CP18825 462 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 SERPINB6P35237 376 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 MATKP42679 507 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 SLC1A4P43007 532 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 LIMK1P53667 647 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 FOLH1Q04609 750 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 WASHC5Q12768 1159 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 RPA4Q13156 261 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 KNOP1Q1ED39 458 aaKnown RBP2.49□□□□□ -2.01
PTPN4-205ENST00000433888 TYSND1Q2T9J0 566 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 IQCCQ4KMZ1 466 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 HERC4Q5GLZ8 1057 aaPredicted RBP2.49□□□□□ -2.01
PTPN4-205ENST00000433888 MARC1Q5VT66 337 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 SUSD4Q5VX71 490 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 NHLRC1Q6VVB1 395 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 DET1Q7L5Y6 550 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 PIGWQ7Z7B1 504 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 PEX5LQ8IYB4 626 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 APCDD1Q8J025 514 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 C10orf53Q8N6V4 93 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 OR4C15Q8NGM1 316 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 OCC1Q8TAD7 63 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 KIAA1524Q8TCG1 905 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 GDAP1L1Q96MZ0 367 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 SPATA33Q96N06 139 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 RUNDC3BQ96NL0 473 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 PARK7Q99497 189 aaKnown RBP2.49□□□□□ -2.01
PTPN4-205ENST00000433888 IL12RB2Q99665 862 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 FNDC4Q9H6D8 234 aaPredicted RBP2.49□□□□□ -2.01
PTPN4-205ENST00000433888 IARS2Q9NSE4 1012 aaKnown RBP2.49□□□□□ -2.01
PTPN4-205ENST00000433888 ABCB8Q9NUT2 735 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 TBC1D7Q9P0N9 293 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 DHRS4-AS1Q9P1J3 65 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 GMEB2Q9UKD1 530 aa2.49□□□□□ -2.01
PTPN4-205ENST00000433888 HBS1LQ9Y450 684 aaKnown RBP2.49□□□□□ -2.01
PTPN4-205ENST00000433888 WI2-2373I1.2A0A1W2PRP0 233 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 BICDL2A1A5D9 508 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 KRT87PA6NCN2 255 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 C5orf51A6NDU8 294 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 A8MVM7 634 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 INPP4BO15327 924 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 VEGFDO43915 354 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 VIMP08670 466 aaKnown RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 UROSP10746 265 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 FASP25445 335 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 GIFP27352 417 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 SFTPDP35247 375 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 TCF7P36402 384 aaPredicted RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 RPL34P49207 117 aaKnown RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 CRYBA2P53672 197 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 BTG1P62324 171 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 GFPT1Q06210 699 aaPredicted RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 ILF2Q12905 390 aaKnown RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 CBX3Q13185 183 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 CCL14Q16627 93 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 ODF2Q5BJF6 829 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 LRRC73Q5JTD7 316 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 TEX35Q5T0J7 233 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 SHEQ5VZ18 495 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 ZCCHC12Q6PEW1 402 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 MOXD1Q6UVY6 613 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 C11orf57Q6ZUT1 292 aaPredicted RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 C5orf24Q7Z6I8 188 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 ABI3BPQ7Z7G0 1075 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 DZIP1Q86YF9 867 aaKnown RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 CCDC83Q8IWF9 413 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 CNTN4Q8IWV2 1026 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 AQP12AQ8IXF9 295 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 DND1Q8IYX4 353 aaKnown RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 ZNF619Q8N2I2 560 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 ATAD1Q8NBU5 361 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 RNASE8Q8TDE3 154 aaKnown RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 TEKT1Q969V4 418 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 CCDC47Q96A33 483 aaKnown RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 CCDC43Q96MW1 224 aaKnown RBP2.48□□□□□ -2.01
PTPN4-205ENST00000433888 OSBPL8Q9BZF1 889 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 ASB8Q9H765 288 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 WDR41Q9HAD4 459 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 MID1IP1Q9NPA3 183 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 MOSPD1Q9UJG1 213 aa2.48□□□□□ -2.01
PTPN4-205ENST00000433888 ITGA11Q9UKX5 1188 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms