RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 AQP7O14520 342 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 SUSD5O60279 629 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 WDR1O75083 606 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 CERS1P27544 350 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 DNAJA1P31689 397 aaKnown RBP13.79□□□□□ -0.2
PRKDC-203ENST00000432581 GDF5P43026 501 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 ZFP36L2P47974 494 aaKnown RBP13.79□□□□□ -0.2
PRKDC-203ENST00000432581 MGAT5Q09328 741 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 SERTAD2Q14140 314 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 TSNQ15631 228 aaKnown RBP13.79□□□□□ -0.2
PRKDC-203ENST00000432581 HYAL4Q2M3T9 481 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 ZNF750Q32MQ0 723 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 ABHD17CQ6PCB6 329 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 OPN5Q6U736 354 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 TCAIMQ8N3R3 496 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 TMEM251Q8N6I4 163 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 NINJ1Q92982 152 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 SCYL1Q96KG9 808 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 CSF3RQ99062 836 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 ALOXE3Q9BYJ1 711 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 OR8D2Q9GZM6 311 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 ROGDIQ9GZN7 287 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 CNOT10Q9H9A5 744 aaKnown RBP13.79□□□□□ -0.2
PRKDC-203ENST00000432581 SACM1LQ9NTJ5 587 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 TEX264Q9Y6I9 313 aa13.79□□□□□ -0.2
PRKDC-203ENST00000432581 FAM221AA4D161 298 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 G3V3Y1 287 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 CLGNO14967 610 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 TBX6O95947 436 aaPredicted RBP13.78□□□□□ -0.2
PRKDC-203ENST00000432581 P04436 131 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 GLI4P10075 376 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 TNNI3P19429 210 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 IVDP26440 423 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 MAGEA5P43359 124 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 KCNC1P48547 511 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 MAN2A2P49641 1150 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 TAS2R39P59534 338 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 RNF4P78317 190 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 FOLH1Q04609 750 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 ILF2Q12905 390 aaKnown RBP13.78□□□□□ -0.2
PRKDC-203ENST00000432581 ZNF460Q14592 562 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 TGFBIQ15582 683 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 C18orf21Q32NC0 220 aaPredicted RBP13.78□□□□□ -0.2
PRKDC-203ENST00000432581 SLC25A35Q3KQZ1 300 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 HP1BP3Q5SSJ5 553 aaPredicted RBP13.78□□□□□ -0.2
PRKDC-203ENST00000432581 FAM47EQ6ZV65 393 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 VN1R5Q7Z5H4 357 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 SRFBP1Q8NEF9 429 aaKnown RBP13.78□□□□□ -0.2
PRKDC-203ENST00000432581 SLC2A12Q8TD20 617 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 SARAFQ96BY9 339 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 KCNC2Q96PR1 638 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 WDR83Q9BRX9 315 aaKnown RBP13.78□□□□□ -0.2
PRKDC-203ENST00000432581 DDX47Q9H0S4 455 aaKnown RBP13.78□□□□□ -0.2
PRKDC-203ENST00000432581 POPDC3Q9HBV1 291 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 LYRM4Q9HD34 91 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 DNAJC11Q9NVH1 559 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 NSMCE4AQ9NXX6 385 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 COPS7AQ9UBW8 275 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 ACAD8Q9UKU7 415 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 FAM215AQ9Y5M1 114 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 LIPGQ9Y5X9 500 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 PSAT1Q9Y617 370 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 ZNF407Q9C0G0 2248 aa13.78□□□□□ -0.2
PRKDC-203ENST00000432581 NCF1BA6NI72 391 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-203ENST00000432581 NCF1CA8MVU1 366 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-203ENST00000432581 C17orf105B2RV13 164 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 HCN1O60741 890 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 NADKO95544 446 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-203ENST00000432581 CD99P14209 185 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 NCF1P14598 390 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-203ENST00000432581 IST1P53990 364 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 ARL4CP56559 192 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 FOXO1Q12778 655 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 SLC10A1Q14973 349 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 CDKL4Q5MAI5 379 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 WLSQ5T9L3 541 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 SYDE1Q6ZW31 735 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-203ENST00000432581 CHDHQ8NE62 594 aaPredicted RBP13.77□□□□□ -0.21
PRKDC-203ENST00000432581 ANKRD49Q8WVL7 239 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 PTCD3Q96EY7 689 aaKnown RBP13.77□□□□□ -0.21
PRKDC-203ENST00000432581 FOXC2Q99958 501 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 EFCAB11Q9BUY7 163 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 DERL2Q9GZP9 239 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 CXXC4Q9H2H0 198 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 LDAHQ9H6V9 325 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 WWOXQ9NZC7 414 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 L3MBTL1Q9Y468 752 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 SPACA6W5XKT8 324 aa13.77□□□□□ -0.21
PRKDC-203ENST00000432581 DNAJC13O75165 2243 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 A0A0G2JNJ9 132 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 ATP6AP2A0A1C7CYW4 349 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 ATP6AP2O75787 350 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 COX7A2P14406 83 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 GABRA1P14867 456 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 GGT5P36269 586 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 PEX19P40855 299 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 DNASE1L1P49184 302 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 SLC12A2P55011 1212 aa13.76□□□□□ -0.21
PRKDC-203ENST00000432581 TBL3Q12788 808 aaKnown RBP13.76□□□□□ -0.21
PRKDC-203ENST00000432581 HIST2H2ACQ16777 129 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms