RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 CDK15Q96Q40 435 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 MTERF1Q99551 399 aaKnown RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 TSPAN10Q9H1Z9 355 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 EPB41L4BQ9H329 900 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 ZBTB26Q9HCK0 441 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 DMRT3Q9NQL9 472 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 FBXW2Q9UKT8 454 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 SYCE1LA8MT33 242 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 TRIM49D1C9J1S8 452 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 PPP6CO00743 305 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 PLPP1O14494 284 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 ZNF354AO60765 605 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 CTNSO60931 367 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 EEDO75530 441 aaKnown RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 UNC5CO95185 931 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 DDAH2O95865 285 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 SP1P08047 785 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 INHBAP08476 426 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 HIST1H1TP22492 207 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 TRHRP34981 398 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 NR0B1P51843 470 aaKnown RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 NEK2P51955 445 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 HNRNPH2P55795 449 aaKnown RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 OC90Q02509 493 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 GLE1Q53GS7 698 aaKnown RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 OR4C11Q6IEV9 310 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 CCDC91Q7Z6B0 441 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 SIAH3Q8IW03 269 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 CHERPQ8IWX8 916 aaKnown RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 OR4N5Q8IXE1 308 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 LGI4Q8N135 537 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 OR52B6Q8NGF0 335 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 DNAJB8Q8NHS0 232 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 WDR20Q8TBZ3 569 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 DOK4Q8TEW6 326 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 PHF21BQ96EK2 531 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 C5orf34Q96MH7 638 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 FRMD6Q96NE9 622 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 TBCDQ9BTW9 1192 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 ALOXE3Q9BYJ1 711 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 DEFB126Q9BYW3 111 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 TXLNGYQ9BZA5 131 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 TRIM45Q9H8W5 580 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 IPPKQ9H8X2 491 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 COPS7BQ9H9Q2 264 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-204ENST00000430682 LRFN1Q9P244 771 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 XPR1Q9UBH6 696 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 PCDHGB6Q9Y5F9 930 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
SMPD4-204ENST00000430682 A0A1W2PS29 197 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ASPDHA6ND91 283 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 H0YIV9 168 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 HRKO00198 91 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 FGF17O60258 216 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ZG16O60844 167 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 EEF1DP29692 281 aaKnown RBP11.65□□□□□ -0.54
SMPD4-204ENST00000430682 BSGP35613 385 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 HLCSP50747 726 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 TAS2R50P59544 299 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 TRAF3Q13114 568 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 TERF2Q15554 542 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 CPSF6Q16630 551 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMPD4-204ENST00000430682 AP5B1Q2VPB7 878 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 TMEM35AQ53FP2 167 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 LIPJQ5W064 366 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 C18orf63Q68DL7 685 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ZNF787Q6DD87 383 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 SLC25A25Q6KCM7 469 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 GFRALQ6UXV0 394 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 MDGA2Q7Z553 956 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 FJX1Q86VR8 437 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 MYLK4Q86YV6 388 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-204ENST00000430682 GSPT2Q8IYD1 628 aaKnown RBP11.65□□□□□ -0.54
SMPD4-204ENST00000430682 CPSF7Q8N684 471 aaKnown RBP11.65□□□□□ -0.54
SMPD4-204ENST00000430682 L3MBTL4Q8NA19 623 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ARMC2Q8NEN0 867 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 SUN3Q8TAQ9 357 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 MTFMTQ96DP5 389 aaKnown RBP11.65□□□□□ -0.54
SMPD4-204ENST00000430682 CMTM7Q96FZ5 175 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 NOL11Q9H8H0 719 aaKnown RBP11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ACTR8Q9H981 624 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 LYRM4Q9HD34 91 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ADAP2Q9NPF8 381 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 VTI1BQ9UEU0 232 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ZNF180Q9UJW8 692 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 PCTPQ9UKL6 214 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 TSC22D4Q9Y3Q8 395 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ATG4BQ9Y4P1 393 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 ANGPTL3Q9Y5C1 460 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 CSMD1Q96PZ7 3565 aa11.65□□□□□ -0.54
SMPD4-204ENST00000430682 A0A087WUV0 522 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-204ENST00000430682 A0A088AWK7 358 aa11.64□□□□□ -0.55
SMPD4-204ENST00000430682 FOXO6A8MYZ6 492 aa11.64□□□□□ -0.55
SMPD4-204ENST00000430682 CLDN4O14493 209 aa11.64□□□□□ -0.55
SMPD4-204ENST00000430682 TMPRSS11DO60235 418 aa11.64□□□□□ -0.55
SMPD4-204ENST00000430682 NME2P1O60361 137 aa11.64□□□□□ -0.55
SMPD4-204ENST00000430682 ITGA10O75578 1167 aa11.64□□□□□ -0.55
SMPD4-204ENST00000430682 SLC25A12O75746 678 aa11.64□□□□□ -0.55
SMPD4-204ENST00000430682 CRYABP02511 175 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms