RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RNF224P0DH78 156 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 COL6A2P12110 1019 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 CPN2P22792 545 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 PPP2R1BP30154 601 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 MAGEA12P43365 314 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 TDGF1P3P51864 188 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 MLF1P58340 268 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 SERTAD2Q14140 314 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 ELAVL1Q15717 326 aaKnown RBP16.42■□□□□ 0.22
NUP50-208ENST00000430547 CPSF6Q16630 551 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUP50-208ENST00000430547 DEPDC1Q5TB30 811 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 OR4C11Q6IEV9 310 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 ZNF793Q6ZN11 406 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 UBE3DQ7Z6J8 389 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 PLD6Q8N2A8 252 aaKnown RBP16.42■□□□□ 0.22
NUP50-208ENST00000430547 APCDD1LQ8NCL9 501 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 THAP3Q8WTV1 239 aaPredicted RBP16.42■□□□□ 0.22
NUP50-208ENST00000430547 DCAKDQ8WVC6 231 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 DAZLQ92904 295 aaKnown RBP16.42■□□□□ 0.22
NUP50-208ENST00000430547 NCLNQ969V3 563 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 PHF21BQ96EK2 531 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 MAPKAP1Q9BPZ7 522 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 DMRT3Q9NQL9 472 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 ZNF358Q9NW07 568 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 XPR1Q9UBH6 696 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 SEC14L3Q9UDX4 400 aa16.42■□□□□ 0.22
NUP50-208ENST00000430547 H0YIV9 168 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 TGFBR3LH3BV60 316 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 LRRTM2O43300 516 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 SLC25A12O75746 678 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 UNC5CO95185 931 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 SP1P08047 785 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 TNNI3P19429 210 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 CCNG1P51959 295 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 KCNK10P57789 538 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 RBPJQ06330 500 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 MAPKAPK3Q16644 382 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 SLC25A25Q6KCM7 469 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 TRMT10CQ7L0Y3 403 aaKnown RBP16.41■□□□□ 0.22
NUP50-208ENST00000430547 GALNTL5Q7Z4T8 443 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 RNF175Q8N4F7 328 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 TMEM156Q8N614 296 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 C7orf57Q8NEG2 295 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 SCMH1Q96GD3 660 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 HES7Q9BYE0 225 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 ALOXE3Q9BYJ1 711 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 MS4A12Q9NXJ0 267 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 KCMF1Q9P0J7 381 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 PHF11Q9UIL8 331 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 TSC22D4Q9Y3Q8 395 aa16.41■□□□□ 0.22
NUP50-208ENST00000430547 A0A1B0GUH1 482 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 STX16-NPEPL1H3BU86 382 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 STX16O14662 325 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 LDB3O75112 727 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 NEURL1O76050 574 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 SCELO95171 688 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 CLDN9O95484 217 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 ABHD2P08910 425 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 SNRPAP09012 282 aaKnown RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 RHOXF2BP0C7M4 288 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 COX7A2P14406 83 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 PTX3P26022 381 aaPredicted RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 TLX1P31314 330 aaPredicted RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 HLCSP50747 726 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 RPS13P62277 151 aaKnown RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 ALDH6A1Q02252 535 aaKnown RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 SLAMF1Q13291 335 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 TTC19Q6DKK2 380 aaPredicted RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 OR14A16Q8NHC5 309 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 MRPL57Q9BQC6 102 aaKnown RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 RHOXF2Q9BQY4 288 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 MRPL46Q9H2W6 279 aaKnown RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 NOL11Q9H8H0 719 aaKnown RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 PPIEQ9UNP9 301 aaKnown RBP16.4■□□□□ 0.22
NUP50-208ENST00000430547 RNF11Q9Y3C5 154 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 CLDN16Q9Y5I7 305 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 DOPEY1Q5JWR5 2465 aa16.4■□□□□ 0.22
NUP50-208ENST00000430547 MYOCOSA0A1B0GUC4 107 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 WIPF3A6NGB9 483 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 PLPP1O14494 284 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 ITGA10O75578 1167 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 ZFAND5O76080 213 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 STSP08842 583 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 MST1P26927 711 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 TRHRP34981 398 aaPredicted RBP16.39■□□□□ 0.21
NUP50-208ENST00000430547 BUD31P41223 144 aaPredicted RBP16.39■□□□□ 0.21
NUP50-208ENST00000430547 SSR4P51571 173 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 ARFIP1P53367 373 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 SRSF11Q05519 484 aaKnown RBP16.39■□□□□ 0.21
NUP50-208ENST00000430547 ZRSR2Q15696 482 aaKnown RBP16.39■□□□□ 0.21
NUP50-208ENST00000430547 ZNF468Q5VIY5 522 aaPredicted RBP16.39■□□□□ 0.21
NUP50-208ENST00000430547 C1QL3Q5VWW1 255 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 FJX1Q86VR8 437 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 L3MBTL4Q8NA19 623 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 MORN4Q8NDC4 146 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 MTBPQ96DY7 904 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 SORBS1Q9BX66 1292 aaKnown RBP16.39■□□□□ 0.21
NUP50-208ENST00000430547 OR8D2Q9GZM6 311 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 COPS7AQ9UBW8 275 aa16.39■□□□□ 0.21
NUP50-208ENST00000430547 VTI1BQ9UEU0 232 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms