RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 TMPRSS11DO60235 418 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 PRKNO60260 465 aaPredicted RBP16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 PRAMEF2O60811 474 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 CTNSO60931 367 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 LDB3O75112 727 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 SMIM24O75264 130 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 CLDN9O95484 217 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 TSPAN8P19075 237 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 TPP2P29144 1249 aaPredicted RBP16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 BSGP35613 385 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 TDGF1P3P51864 188 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 CDH13P55290 713 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 HNRNPH2P55795 449 aaKnown RBP16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 ID2Q02363 134 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 TERF2Q15554 542 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 MEP1AQ16819 746 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 AP5B1Q2VPB7 878 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 LETMD1Q6P1Q0 360 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 SH2D5Q6ZV89 423 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 SLC5A8Q8N695 610 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 SRFBP1Q8NEF9 429 aaKnown RBP16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 ARMC2Q8NEN0 867 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 B3GNT7Q8NFL0 401 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 PTPMT1Q8WUK0 201 aaPredicted RBP16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 ANKRD9Q96BM1 317 aaPredicted RBP16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 ROGDIQ9GZN7 287 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 CDCP1Q9H5V8 836 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 SEMA4BQ9NPR2 832 aaPredicted RBP16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 TBK1Q9UHD2 729 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 FBXW2Q9UKT8 454 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 EMCNQ9ULC0 261 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 TMCO1Q9UM00 188 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 ATG4BQ9Y4P1 393 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 SVILO95425 2214 aa16.89■□□□□ 0.29
SSR4P1-202ENST00000429427 A0A0A6YYD5 115 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 A0A1W2PPM1 405 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 ANKUB1A6NFN9 424 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 TMEM200CA6NKL6 621 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 WASHC1A8K0Z3 465 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 GABRR3A8MPY1 467 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 CYSRT1A8MQ03 144 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 FOXE1O00358 373 aaPredicted RBP16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 CLDN4O14493 209 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 FGF17O60258 216 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 DLX3O60479 287 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 NEURL1O76050 574 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 MLF1P58340 268 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 PMP22Q01453 160 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 SLAMF1Q13291 335 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 C18orf63Q68DL7 685 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 SPINK14Q6IE38 97 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 MRM1Q6IN84 353 aaKnown RBP16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 RPS19BP1Q86WX3 136 aaKnown RBP16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 LGI4Q8N135 537 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 ZCCHC7Q8N3Z6 543 aaKnown RBP16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 ZNF321PQ8N8H1 164 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 ST6GALNAC3Q8NDV1 305 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 OR4F6Q8NGB9 312 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 NCLNQ969V3 563 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 RGMAQ96B86 450 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 TMEM237Q96Q45 408 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 ADAP2Q9NPF8 381 aa16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 FARSBQ9NSD9 589 aaKnown RBP16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 MRPS33Q9Y291 106 aaKnown RBP16.88■□□□□ 0.29
SSR4P1-202ENST00000429427 TRBV11-1A0A0K0K1C0 115 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 PYGBP11216 843 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 PTX3P26022 381 aaPredicted RBP16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 MST1P26927 711 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 CCNG1P51959 295 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 IGLV3-21P80748 117 aaPredicted RBP16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 CUL3Q13618 768 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 OR1C1Q15619 314 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 ELAVL1Q15717 326 aaKnown RBP16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 GGTA1PQ4G0N0 100 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 UNC50Q53HI1 259 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 ZNF766Q5HY98 468 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 LGSNQ5TDP6 509 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 FRG2Q64ET8 278 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 C16orf47Q6ZP98 133 aaPredicted RBP16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 DGAT2L6Q6ZPD8 337 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 OR4N5Q8IXE1 308 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 PRR7Q8TB68 274 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 UCN3Q969E3 161 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 MTFMTQ96DP5 389 aaKnown RBP16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 SCMH1Q96GD3 660 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 FRG2BQ96QU4 278 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 ALOXE3Q9BYJ1 711 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 DDX31Q9H8H2 851 aaKnown RBP16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 AGPAT4Q9NRZ5 378 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 PSD3Q9NYI0 1048 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 VTI1BQ9UEU0 232 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 PPT2Q9UMR5 302 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 ASB4Q9Y574 426 aa16.87■□□□□ 0.29
SSR4P1-202ENST00000429427 IQANK1A0A1B0GTG1 560 aa16.86■□□□□ 0.29
SSR4P1-202ENST00000429427 DDAH2O95865 285 aa16.86■□□□□ 0.29
SSR4P1-202ENST00000429427 GBAP04062 536 aa16.86■□□□□ 0.29
SSR4P1-202ENST00000429427 CPN2P22792 545 aa16.86■□□□□ 0.29
SSR4P1-202ENST00000429427 SLCO1A2P46721 670 aa16.86■□□□□ 0.29
SSR4P1-202ENST00000429427 RAP1GDS1P52306 607 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms