RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 NSG1A0A0A6YYJ2 146 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 PIP5K1BO14986 540 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 TMPRSS11DO60235 418 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 PRKRAO75569 313 aaKnown RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 DNAJB5O75953 348 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 MYO1DO94832 1006 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 IFNA16P05015 189 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 FGF4P08620 206 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 TNNI3P19429 210 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 TSFMP43897 325 aaKnown RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 ALDH9A1P49189 494 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 HNRNPFP52597 415 aaKnown RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 RRADP55042 308 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 OR4D2P58180 307 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 ZNF33BQ06732 778 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 TBL3Q12788 808 aaKnown RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 PDCD2Q16342 344 aaPredicted RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 GALNTL6Q49A17 601 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 KANK2Q63ZY3 851 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 CPZQ66K79 652 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 RIPOR1Q6ZS17 1223 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 ZCCHC7Q8N3Z6 543 aaKnown RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 ZNF781Q8N8C0 355 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 TMEM52Q8NDY8 209 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 ADAMTS17Q8TE56 1095 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 TWIST2Q8WVJ9 160 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 NECTIN3Q9NQS3 549 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 PRDM9Q9NQV7 894 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 PNO1Q9NRX1 252 aaKnown RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 LANCL2Q9NS86 450 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 LYARQ9NX58 379 aaKnown RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 MS4A12Q9NXJ0 267 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 C19orf25Q9UFG5 118 aaPredicted RBP13.7□□□□□ -0.22
SGCE-204ENST00000428696 DNAJC15Q9Y5T4 150 aa13.7□□□□□ -0.22
SGCE-204ENST00000428696 A0A0A6YYD5 115 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 ATP6AP2A0A1C7CYW4 349 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 FER1L5A0AVI2 2057 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 WASHC1A8K0Z3 465 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 SOCS6O14544 535 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 PCDH7O60245 1069 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 LDB3O75112 727 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 ATP6AP2O75787 350 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 SEC24DO94855 1032 aaPredicted RBP13.69□□□□□ -0.22
SGCE-204ENST00000428696 FAM87AP0C7U9 286 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 KITP10721 976 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 BUD31P41223 144 aaPredicted RBP13.69□□□□□ -0.22
SGCE-204ENST00000428696 EFNA3P52797 238 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 HNRNPH2P55795 449 aaKnown RBP13.69□□□□□ -0.22
SGCE-204ENST00000428696 RHAGQ02094 409 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 GALNT1Q10472 559 aaPredicted RBP13.69□□□□□ -0.22
SGCE-204ENST00000428696 CRTC2Q53ET0 693 aaPredicted RBP13.69□□□□□ -0.22
SGCE-204ENST00000428696 SPIN4Q56A73 249 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 SFT2D3Q587I9 215 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 ATG14Q6ZNE5 492 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 MED25Q71SY5 747 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 TRIM46Q7Z4K8 759 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 CPEB2Q7Z5Q1 589 aaKnown RBP13.69□□□□□ -0.22
SGCE-204ENST00000428696 ANKRD37Q7Z713 158 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 ZNF595Q8IYB9 648 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 OR11G2Q8NGC1 345 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 OR6Y1Q8NGX8 325 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 ADAMTS18Q8TE60 1221 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 CHTF18Q8WVB6 975 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 ZNF75CPQ92670 426 aaPredicted RBP13.69□□□□□ -0.22
SGCE-204ENST00000428696 C20orf27Q9GZN8 174 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 RPF2Q9H7B2 306 aaKnown RBP13.69□□□□□ -0.22
SGCE-204ENST00000428696 ATP13A2Q9NQ11 1180 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 PFDN4Q9NQP4 134 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 PNPOQ9NVS9 261 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 PPT2Q9UMR5 302 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 RAP2CQ9Y3L5 183 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 ASB4Q9Y574 426 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 KCNMB2Q9Y691 235 aa13.69□□□□□ -0.22
SGCE-204ENST00000428696 CCDC88CQ9P219 2028 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 A0A1W2PR48 441 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 CYR61O00622 381 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 PROM1O43490 865 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 CTNSO60931 367 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 PEX11AO75192 247 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 GUCY1B2O75343 617 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 ANXA4P09525 319 aaPredicted RBP13.68□□□□□ -0.22
SGCE-204ENST00000428696 NR2F6P10588 404 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 NR1D1P20393 614 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 ITGA3P26006 1051 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 TPP2P29144 1249 aaPredicted RBP13.68□□□□□ -0.22
SGCE-204ENST00000428696 RPL14P50914 215 aaKnown RBP13.68□□□□□ -0.22
SGCE-204ENST00000428696 ARFIP1P53367 373 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 IRAK1BP1Q5VVH5 260 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 NDUFAF7Q7L592 441 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 TMEM102Q8N9M5 508 aaPredicted RBP13.68□□□□□ -0.22
SGCE-204ENST00000428696 LRRC8CQ8TDW0 803 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 UCN3Q969E3 161 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 ZNF717Q9BY31 904 aaPredicted RBP13.68□□□□□ -0.22
SGCE-204ENST00000428696 ALOXE3Q9BYJ1 711 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 TUBB1Q9H4B7 451 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 LRTM1Q9HBL6 345 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 THAP1Q9NVV9 213 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 MARCOQ9UEW3 520 aaPredicted RBP13.68□□□□□ -0.22
SGCE-204ENST00000428696 ADAM29Q9UKF5 820 aa13.68□□□□□ -0.22
SGCE-204ENST00000428696 POLR3HQ9Y535 204 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms