RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 CDC42EP4Q9H3Q1 356 aaKnown RBP9.5□□□□□ -0.89
COMMD1-202ENST00000427417 ACTR8Q9H981 624 aa9.5□□□□□ -0.89
COMMD1-202ENST00000427417 MS4A12Q9NXJ0 267 aa9.5□□□□□ -0.89
COMMD1-202ENST00000427417 NINJ2Q9NZG7 142 aa9.5□□□□□ -0.89
COMMD1-202ENST00000427417 FBXW2Q9UKT8 454 aa9.5□□□□□ -0.89
COMMD1-202ENST00000427417 TMCO1Q9UM00 188 aa9.5□□□□□ -0.89
COMMD1-202ENST00000427417 KLF13Q9Y2Y9 288 aaPredicted RBP9.5□□□□□ -0.89
COMMD1-202ENST00000427417 TSC22D4Q9Y3Q8 395 aa9.5□□□□□ -0.89
COMMD1-202ENST00000427417 ASB1Q9Y576 335 aa9.5□□□□□ -0.89
COMMD1-202ENST00000427417 PCDHGA11Q9Y5H2 935 aa9.5□□□□□ -0.89
COMMD1-202ENST00000427417 MYO7BQ6PIF6 2116 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 HMX2A2RU54 273 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 KLRC4-KLRK1H3BQV0 150 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 DYRK3O43781 588 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 KLK8O60259 260 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 NME2P1O60361 137 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 ITGA10O75578 1167 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 KRT38O76015 456 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 SCELO95171 688 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 ACSL3O95573 720 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 ALDOAP04075 364 aaKnown RBP9.49□□□□□ -0.89
COMMD1-202ENST00000427417 RBP1P09455 135 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 COX7A2P14406 83 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 TNNI3P19429 210 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 NME2P22392 152 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 TLX1P31314 330 aaPredicted RBP9.49□□□□□ -0.89
COMMD1-202ENST00000427417 RAP1GDS1P52306 607 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 HNRNPFP52597 415 aaKnown RBP9.49□□□□□ -0.89
COMMD1-202ENST00000427417 IRF9Q00978 393 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 BIKQ13323 160 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 PCBP2Q15366 365 aaKnown RBP eCLIP9.49□□□□□ -0.89
COMMD1-202ENST00000427417 TSNAXIP1Q2TAA8 658 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 DEPDC1Q5TB30 811 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 OR4C11Q6IEV9 310 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.49□□□□□ -0.89
COMMD1-202ENST00000427417 CLNKQ7Z7G1 428 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 GPALPP1Q8IXQ4 340 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 SLC34A3Q8N130 599 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 CYP4Z2PQ8N1L4 340 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 MORN4Q8NDC4 146 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 TMEM52Q8NDY8 209 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 HUS1BQ8NHY5 278 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 SLC44A1Q8WWI5 657 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 NCLNQ969V3 563 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 RGMAQ96B86 450 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 FRMD6Q96NE9 622 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 CSF3RQ99062 836 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 HES7Q9BYE0 225 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 ALOXE3Q9BYJ1 711 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 VPS11Q9H270 941 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 KCMF1Q9P0J7 381 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 VTI1BQ9UEU0 232 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 PHF11Q9UIL8 331 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 YARS2Q9Y2Z4 477 aaKnown RBP9.49□□□□□ -0.89
COMMD1-202ENST00000427417 NOTCH2Q04721 2471 aa9.49□□□□□ -0.89
COMMD1-202ENST00000427417 A0A087WUV0 522 aaPredicted RBP9.48□□□□□ -0.89
COMMD1-202ENST00000427417 NPIPA5E9PKD4 350 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 H0YIV9 168 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 TGFBR3LH3BV60 316 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 CCL21O00585 134 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 SLC19A2O60779 497 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 ZG16O60844 167 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 COL6A2P12110 1019 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 ZNF24P17028 368 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 CPN2P22792 545 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 PTX3P26022 381 aaPredicted RBP9.48□□□□□ -0.89
COMMD1-202ENST00000427417 PPP2R1BP30154 601 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 DCTP40126 519 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 BUD31P41223 144 aaPredicted RBP9.48□□□□□ -0.89
COMMD1-202ENST00000427417 CA7P43166 264 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 SSR4P51571 173 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 GPR143P51810 404 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 SLAMF1Q13291 335 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 DDX39BQ13838 428 aaKnown RBP9.48□□□□□ -0.89
COMMD1-202ENST00000427417 GTF2H2Q13888 395 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 TECRLQ5HYJ1 363 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 LGSNQ5TDP6 509 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 ZNF468Q5VIY5 522 aaPredicted RBP9.48□□□□□ -0.89
COMMD1-202ENST00000427417 GTF2H2CQ6P1K8 395 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 RPTNQ6XPR3 784 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 HSDL2Q6YN16 418 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 ZNF793Q6ZN11 406 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 UBE3DQ7Z6J8 389 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 GHDCQ8N2G8 530 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 NOA1Q8NC60 698 aaKnown RBP9.48□□□□□ -0.89
COMMD1-202ENST00000427417 OR5L2Q8NGL0 311 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 OR8K3Q8NH51 312 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 ISL2Q96A47 359 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 PAFAH2Q99487 392 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 MAPKAP1Q9BPZ7 522 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 OR51B5Q9H339 312 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 IPPKQ9H8X2 491 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 TIMMDC1Q9NPL8 285 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 DMRT3Q9NQL9 472 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 PSD3Q9NYI0 1048 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 CPSF2Q9P2I0 782 aaKnown RBP9.48□□□□□ -0.89
COMMD1-202ENST00000427417 COPS7AQ9UBW8 275 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 DMGDHQ9UI17 866 aaKnown RBP9.48□□□□□ -0.89
COMMD1-202ENST00000427417 SH3BGRL2Q9UJC5 107 aa9.48□□□□□ -0.89
COMMD1-202ENST00000427417 NPIPA1Q9UND3 350 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms