RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SELENOMQ8WWX9 145 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 KIAA1143Q96AT1 154 aaPredicted RBP7□□□□□ -1.29
LINC01049-201ENST00000426840 FKBP10Q96AY3 582 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 RGMAQ96B86 450 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 C17orf62Q9BQA9 187 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 TBCDQ9BTW9 1192 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 EFHD1Q9BUP0 239 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 SSBP4Q9BWG4 385 aaPredicted RBP7□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF717Q9BY31 904 aaPredicted RBP7□□□□□ -1.29
LINC01049-201ENST00000426840 TGIF2Q9GZN2 237 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 C20orf27Q9GZN8 174 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 KCMF1Q9P0J7 381 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 CTSFQ9UBX1 484 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 GPN3Q9UHW5 284 aaPredicted RBP7□□□□□ -1.29
LINC01049-201ENST00000426840 KCND3Q9UK17 655 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 TCFL5Q9UL49 500 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 CCL27Q9Y4X3 112 aa7□□□□□ -1.29
LINC01049-201ENST00000426840 MAP1BP46821 2468 aaKnown RBP7□□□□□ -1.29
LINC01049-201ENST00000426840 PTPRQQ9UMZ3 2332 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF860A6NHJ4 632 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 C9J4A7 227 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 SAP18O00422 153 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 PLPP1O14494 284 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 AZIN1O14977 448 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 DYRK3O43781 588 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ULK1O75385 1050 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 JRKO75564 520 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 LYPLA1O75608 230 aaPredicted RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 SCELO95171 688 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 BMP10O95393 424 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 KRT6AP02538 564 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 KRT6BP04259 564 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ZGLP1P0C6A0 271 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 UROSP10746 265 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ESRRAP11474 423 aaPredicted RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 BGNP21810 368 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ATP5A1P25705 553 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 HMOX2P30519 316 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 HPDP32754 393 aaPredicted RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 KRT6CP48668 564 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ARFIP1P53367 373 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 MTTPP55157 894 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ABCE1P61221 599 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 OLR1P78380 273 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 PHEXP78562 749 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 OCA2Q04671 838 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF33BQ06732 778 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 TBL3Q12788 808 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 STX3Q13277 289 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 SSPNQ14714 243 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ABRAXAS2Q15018 415 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ST3GAL2Q16842 350 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 BROXQ5VW32 411 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 MRM1Q6IN84 353 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 NIPAL1Q6NVV3 410 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 TRIM40Q6P9F5 258 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF793Q6ZN11 406 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 CCDC81Q6ZN84 652 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 CUZD1Q86UP6 607 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ZC3H7AQ8IWR0 971 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 CLYBLQ8N0X4 340 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 CA13Q8N1Q1 262 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 METTL4Q8N3J2 472 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 GBP7Q8N8V2 638 aaPredicted RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ACOT4Q8N9L9 421 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 OR2Y1Q8NGV0 311 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 MGARPQ8TDB4 240 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ADAMTS17Q8TE56 1095 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 CHTF18Q8WVB6 975 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 SNRNP27Q8WVK2 155 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 MIEF2Q96C03 454 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 PEX11GQ96HA9 241 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 FAR2Q96K12 515 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 SERINC2Q96SA4 455 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 HBEGFQ99075 208 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 SERPINI1Q99574 410 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 PAIP2Q9BPZ3 127 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 YIPF2Q9BWQ6 316 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 SORBS1Q9BX66 1292 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 NPLQ9BXD5 320 aaPredicted RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 TUBB1Q9H4B7 451 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ACTL8Q9H568 366 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ELOVL6Q9H5J4 265 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 DDX31Q9H8H2 851 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 WDR54Q9H977 334 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 BRF2Q9HAW0 419 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 EML4Q9HC35 981 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 CPNE5Q9HCH3 593 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 MKKSQ9NPJ1 570 aaPredicted RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 LANCL2Q9NS86 450 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 NKIRAS1Q9NYS0 192 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 HCN3Q9P1Z3 774 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 TRPC4Q9UBN4 977 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF282Q9UDV7 671 aaPredicted RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 ZDHHC2Q9UIJ5 367 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 PTRH2Q9Y3E5 179 aaKnown RBP6.99□□□□□ -1.29
LINC01049-201ENST00000426840 TRAF6Q9Y4K3 522 aa6.99□□□□□ -1.29
LINC01049-201ENST00000426840 OR2W5A6NFC9 320 aa6.98□□□□□ -1.29
LINC01049-201ENST00000426840 ZNF891A8MT65 544 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms