RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 SLC29A3Q9BZD2 475 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 EPN3Q9H201 632 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 DDX31Q9H8H2 851 aaKnown RBP16.9■□□□□ 0.3
HERC3-205ENST00000426683 CLDN16Q9Y5I7 305 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 BOD1L1Q8NFC6 3051 aa16.9■□□□□ 0.3
HERC3-205ENST00000426683 A0A0A6YYD5 115 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 SAGE2PA6NJ88 616 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 TGFBR3LH3BV60 316 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 MANBAO00462 879 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 RGS16O15492 202 aaPredicted RBP16.89■□□□□ 0.29
HERC3-205ENST00000426683 CTNSO60931 367 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 KRT6AP02538 564 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 KRT6BP04259 564 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 HMOX2P30519 316 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 SOX11P35716 441 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 KRT6CP48668 564 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 NAA20P61599 178 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 PCLAFQ15004 111 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 LIPMQ5VYY2 423 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 B3GNTL1Q67FW5 361 aaPredicted RBP16.89■□□□□ 0.29
HERC3-205ENST00000426683 SLC6A19Q695T7 634 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 CYP20A1Q6UW02 462 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 IGFL2Q6UWQ7 119 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 GPR180Q86V85 440 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 C10orf107Q8IVU9 208 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 AGAP11Q8TF27 550 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 ZIM3Q96PE6 472 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 FAM111AQ96PZ2 611 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 LMF1Q96S06 567 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 HBEGFQ99075 208 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 BRF2Q9HAW0 419 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 KCNK13Q9HB14 408 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 MMP25Q9NPA2 562 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 MID1IP1Q9NPA3 183 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 PNO1Q9NRX1 252 aaKnown RBP16.89■□□□□ 0.29
HERC3-205ENST00000426683 LYARQ9NX58 379 aaKnown RBP16.89■□□□□ 0.29
HERC3-205ENST00000426683 MS4A12Q9NXJ0 267 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 AHSPQ9NZD4 102 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 LUZP4Q9P127 313 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 PHF11Q9UIL8 331 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 SLC12A4Q9UP95 1085 aa16.89■□□□□ 0.29
HERC3-205ENST00000426683 TLN1Q9Y490 2541 aaKnown RBP16.88■□□□□ 0.29
HERC3-205ENST00000426683 BLACEA4D250 179 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 A8MUI8 341 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 UBFD1O14562 309 aaKnown RBP16.88■□□□□ 0.29
HERC3-205ENST00000426683 TMPRSS11DO60235 418 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 LDB3O75112 727 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 ERLIN1O75477 346 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 ESRRBO95718 433 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 GBAP04062 536 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 ENO1P06733 434 aaKnown RBP16.88■□□□□ 0.29
HERC3-205ENST00000426683 CREB1P16220 341 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 PPP2R1BP30154 601 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 HNRNPH2P55795 449 aaKnown RBP16.88■□□□□ 0.29
HERC3-205ENST00000426683 TNFRSF17Q02223 184 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 TLE1Q04724 770 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 STX4Q12846 297 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 CEP85LQ5SZL2 805 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 FRMD7Q6ZUT3 714 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 IQCKQ8N0W5 287 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 TCP10LQ8TDR4 215 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 PNPLA2Q96AD5 504 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 KCNA7Q96RP8 456 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 MRPL1Q9BYD6 325 aaKnown RBP16.88■□□□□ 0.29
HERC3-205ENST00000426683 TRIM4Q9C037 500 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 SLC17A7Q9P2U7 560 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 ATG4BQ9Y4P1 393 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 CSAG2Q9Y5P2 127 aa16.88■□□□□ 0.29
HERC3-205ENST00000426683 MYOCOSA0A1B0GUC4 107 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 ULK1O75385 1050 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 MYO1DO94832 1006 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 SORBS2O94875 1100 aaKnown RBP16.87■□□□□ 0.29
HERC3-205ENST00000426683 FAM58BPP0C7Q3 252 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 TLX1P31314 330 aaPredicted RBP16.87■□□□□ 0.29
HERC3-205ENST00000426683 BUD31P41223 144 aaPredicted RBP16.87■□□□□ 0.29
HERC3-205ENST00000426683 HTR6P50406 440 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 ID2Q02363 134 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 C18orf63Q68DL7 685 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 MRM1Q6IN84 353 aaKnown RBP16.87■□□□□ 0.29
HERC3-205ENST00000426683 METTL4Q8N3J2 472 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 NFAM1Q8NET5 270 aaPredicted RBP16.87■□□□□ 0.29
HERC3-205ENST00000426683 ZBTB9Q96C00 473 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 ALOXE3Q9BYJ1 711 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 RPF2Q9H7B2 306 aaKnown RBP16.87■□□□□ 0.29
HERC3-205ENST00000426683 SLAMF7Q9NQ25 335 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 NMRK1Q9NWW6 199 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 SENP1Q9P0U3 644 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 B3GNT3Q9Y2A9 372 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 ASB4Q9Y574 426 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 TIMM22Q9Y584 194 aa16.87■□□□□ 0.29
HERC3-205ENST00000426683 ARHGAP10A1A4S6 786 aa16.86■□□□□ 0.29
HERC3-205ENST00000426683 CCDC151A5D8V7 595 aa16.86■□□□□ 0.29
HERC3-205ENST00000426683 SYNDIG1LA6NDD5 238 aa16.86■□□□□ 0.29
HERC3-205ENST00000426683 TTLL8A6PVC2 850 aa16.86■□□□□ 0.29
HERC3-205ENST00000426683 PYCARD-AS1I3L0S3 204 aa16.86■□□□□ 0.29
HERC3-205ENST00000426683 PROM1O43490 865 aa16.86■□□□□ 0.29
HERC3-205ENST00000426683 TRIM13O60858 407 aa16.86■□□□□ 0.29
HERC3-205ENST00000426683 PRKRAO75569 313 aaKnown RBP16.86■□□□□ 0.29
HERC3-205ENST00000426683 IFNA16P05015 189 aa16.86■□□□□ 0.29
HERC3-205ENST00000426683 KLK1P06870 262 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms