RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MS4A12Q9NXJ0 267 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 PHF11Q9UIL8 331 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 SPACA6W5XKT8 324 aa23.03■■□□□ 1.28
VEGFA-209ENST00000425836 ARHGAP10A1A4S6 786 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 NPIPB8E9PQR5 432 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 PROM1O43490 865 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 RGS14O43566 566 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 PRMT3O60678 531 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 C8orf89P0DMQ9 161 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 RAE1P78406 368 aaKnown RBP23.02■■□□□ 1.28
VEGFA-209ENST00000425836 OCRLQ01968 901 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 GPR155Q7Z3F1 870 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 ZNF595Q8IYB9 648 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 METTL21AQ8WXB1 218 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 TSLPQ969D9 159 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 C8orf44Q96CB5 159 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 PTCHD1Q96NR3 888 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 PRDM9Q9NQV7 894 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 PNPOQ9NVS9 261 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 SIRT5Q9NXA8 310 aa23.02■■□□□ 1.28
VEGFA-209ENST00000425836 MRPS33Q9Y291 106 aaKnown RBP23.02■■□□□ 1.28
VEGFA-209ENST00000425836 A0A1W2PR48 441 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 SKAP2O75563 359 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-209ENST00000425836 PRPH2P23942 346 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 MAPK12P53778 367 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 NSDHLQ15738 373 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 C18orf63Q68DL7 685 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 GALNT18Q6P9A2 607 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 SCUBE1Q8IWY4 988 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 DYDC1Q8WWB3 177 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 PRTFDC1Q9NRG1 225 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 MCM8Q9UJA3 840 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 MAN2B2Q9Y2E5 1009 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 MMACHCQ9Y4U1 282 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 USP24Q9UPU5 2620 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 LOC102723996A0A087X1L8 192 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 PEX12O00623 359 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 CLDN4O14493 209 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 PCDH17O14917 1159 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 MAOAP21397 527 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 HSD17B7P56937 341 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 TNFRSF17Q02223 184 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 XKR7Q5GH72 579 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 LANCL3Q6ZV70 420 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 KIRREL3Q8IZU9 778 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 OR11G2Q8NGC1 345 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 C3orf30Q96M34 536 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 LRTM1Q9HBL6 345 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 NECTIN3Q9NQS3 549 aa23.01■■□□□ 1.27
VEGFA-209ENST00000425836 IGKV3D-11A0A0A0MRZ8 115 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 PCDH7O60245 1069 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 JUNP05412 331 aaKnown RBP23■■□□□ 1.27
VEGFA-209ENST00000425836 ACPPP15309 386 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 TLX1P31314 330 aaPredicted RBP23■■□□□ 1.27
VEGFA-209ENST00000425836 TIA1P31483 386 aaKnown RBP eCLIP23■■□□□ 1.279e-14■■■□□ 15.1
VEGFA-209ENST00000425836 BUD31P41223 144 aaPredicted RBP23■■□□□ 1.27
VEGFA-209ENST00000425836 KIAA0040Q15053 153 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 NR6A1Q15406 480 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 ANKRD37Q7Z713 158 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 LRRC8CQ8TDW0 803 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 TM4SF18Q96CE8 201 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 METTL2AQ96IZ6 378 aaKnown RBP23■■□□□ 1.27
VEGFA-209ENST00000425836 CCT7Q99832 543 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 RPF2Q9H7B2 306 aaKnown RBP23■■□□□ 1.27
VEGFA-209ENST00000425836 C1orf109Q9NX04 203 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 TEX10Q9NXF1 929 aaPredicted RBP23■■□□□ 1.27
VEGFA-209ENST00000425836 CLDN16Q9Y5I7 305 aa23■■□□□ 1.27
VEGFA-209ENST00000425836 PTPRQQ9UMZ3 2332 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 BLACEA4D250 179 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 TGFBR3LH3BV60 316 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 LSM1O15116 133 aaKnown RBP22.99■■□□□ 1.27
VEGFA-209ENST00000425836 CTNSO60931 367 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 SEC22BO75396 215 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 PRKRAO75569 313 aaKnown RBP22.99■■□□□ 1.27
VEGFA-209ENST00000425836 AIFM1O95831 613 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 PDCD2Q16342 344 aaPredicted RBP22.99■■□□□ 1.27
VEGFA-209ENST00000425836 CKAP2Q8WWK9 683 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 UCN3Q969E3 161 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 C19orf60Q96EN9 201 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 EBPLQ9BY08 206 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 FBXL4Q9UKA2 621 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 KCNMB2Q9Y691 235 aa22.99■■□□□ 1.27
VEGFA-209ENST00000425836 A0A1W2PQ72 361 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 ARGFXA6NJG6 315 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 WASHC1A8K0Z3 465 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 COX6A1P12074 109 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 TRA2BP62995 288 aaKnown RBP22.98■■□□□ 1.27
VEGFA-209ENST00000425836 EEF1A2Q05639 463 aaKnown RBP22.98■■□□□ 1.27
VEGFA-209ENST00000425836 SLC13A2Q13183 592 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 TBR1Q16650 682 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 CPEB2Q7Z5Q1 589 aaKnown RBP22.98■■□□□ 1.27
VEGFA-209ENST00000425836 CLNKQ7Z7G1 428 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 FAM76AQ8TAV0 307 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 C19orf25Q9UFG5 118 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-209ENST00000425836 POLR3HQ9Y535 204 aaPredicted RBP22.98■■□□□ 1.27
VEGFA-209ENST00000425836 PCSK5Q92824 1860 aa22.98■■□□□ 1.27
VEGFA-209ENST00000425836 IGHV3-20A0A0C4DH32 117 aa22.97■■□□□ 1.27
VEGFA-209ENST00000425836 ATP6AP2A0A1C7CYW4 349 aa22.97■■□□□ 1.27
VEGFA-209ENST00000425836 GNG14A0A1W2PPG7 69 aa22.97■■□□□ 1.27
VEGFA-209ENST00000425836 MASP2O00187 686 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms