RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 GSK3BP49841 420 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 DGKQP52824 942 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 CSNK1G2P78368 415 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 SHC2P98077 582 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 ACY1Q03154 408 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 CYP4F3Q08477 520 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 RTP5Q14D33 572 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 MTX3Q5HYI7 312 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 PRAMEF17Q5VTA0 474 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 FRMPD2BQ6IN97 320 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 RNF111Q6ZNA4 994 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 TMPRSS11BQ86T26 416 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 MCATQ8IVS2 390 aaKnown RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 N4BP2L2Q92802 583 aaPredicted RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 ZNF501Q96CX3 271 aaPredicted RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 TAAR9Q96RI9 348 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 PRPF18Q99633 342 aaKnown RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 SPRTNQ9H040 489 aaPredicted RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 SYNPO2LQ9H987 977 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 BATF3Q9NR55 127 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 CCM2LQ9NUG4 571 aaPredicted RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 TMEM184CQ9NVA4 438 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 MAGEL2Q9UJ55 1249 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 CNOT11Q9UKZ1 510 aaKnown RBP14.84□□□□□ -0.03
SHOX2-202ENST00000425436 PCDHB3Q9Y5E6 796 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 KLK4Q9Y5K2 254 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 B3GALT1Q9Y5Z6 326 aa14.84□□□□□ -0.03
SHOX2-202ENST00000425436 A0A096LPI6 279 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 LOC105369274A0A096LPK9 316 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 LOC102723532A0A0G2JNH3 316 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 TIAF1O95411 115 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 CAPNS1P04632 268 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 RPSAP08865 295 aaKnown RBP14.83□□□□□ -0.04
SHOX2-202ENST00000425436 PCNAP12004 261 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 HOXB6P17509 224 aaKnown RBP14.83□□□□□ -0.04
SHOX2-202ENST00000425436 TRPC1P48995 793 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 SPANXN4Q5MJ08 99 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 DCAF12Q5T6F0 453 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 IZUMO2Q6UXV1 221 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 GPR180Q86V85 440 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 RIMKLAQ8IXN7 391 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 OR4N4Q8N0Y3 316 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 TMEM132CQ8N3T6 1108 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 ICA1LQ8NDH6 482 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 VPS37AQ8NEZ2 397 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 OR1L3Q8NH93 324 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 HUS1BQ8NHY5 278 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 CHTF18Q8WVB6 975 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 ZNF570Q96NI8 536 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 BTBD9Q96Q07 612 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 MTERF1Q99551 399 aaKnown RBP14.83□□□□□ -0.04
SHOX2-202ENST00000425436 CHRNA10Q9GZZ6 450 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 SPNS1Q9H2V7 528 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 PELI2Q9HAT8 420 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 STARD5Q9NSY2 213 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 FOXJ2Q9P0K8 574 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 PILRAQ9UKJ1 303 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 RARRES3Q9UL19 164 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 PLCL2Q9UPR0 1127 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 DLGAP4Q9Y2H0 992 aa14.83□□□□□ -0.04
SHOX2-202ENST00000425436 H0YJX3 145 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 LCMT2O60294 686 aaKnown RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 STATHP02808 62 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 FCGR1AP12314 374 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 PSMA4P25789 261 aaKnown RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 SLC5A2P31639 672 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 RPL3P39023 403 aaKnown RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 HSPA13P48723 471 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 CCR8P51685 355 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 SLBPQ14493 270 aaKnown RBP eCLIP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 IL11RAQ14626 422 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 ZC3H12BQ5HYM0 836 aaKnown RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 LRIF1Q5T3J3 769 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 GALNT18Q6P9A2 607 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 PPP1R3BQ86XI6 285 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 PDSS2Q86YH6 399 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 ZNF740Q8NDX6 193 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 ABHD11Q8NFV4 315 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 OR4K1Q8NGD4 311 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 NXPE2Q96DL1 559 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 C11orf24Q96F05 449 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 NT5DC2Q9H857 520 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 COPS7BQ9H9Q2 264 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 PRM3Q9NNZ6 103 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 ASCL3Q9NQ33 180 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 IRAK4Q9NWZ3 460 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 AHSPQ9NZD4 102 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 RIMS3Q9UJD0 308 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 SERTAD3Q9UJW9 196 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 MAGEB17A8MXT2 336 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 ARPC2O15144 300 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 EIF2S1P05198 315 aaKnown RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 FGF5P12034 268 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 HRH2P25021 359 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 PTX3P26022 381 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 KIR3DL1P43629 444 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 GTF2A1P52655 376 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 VSX2P58304 361 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-202ENST00000425436 RUNDC3AQ59EK9 446 aa14.82□□□□□ -0.04
SHOX2-202ENST00000425436 RABL3Q5HYI8 236 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms