RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 CLDN9O95484 217 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 BSGP35613 385 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 SSR2P43308 183 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 TDGF1P3P51864 188 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 SLC13A2Q13183 592 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 TERF2Q15554 542 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 AP5B1Q2VPB7 878 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 TEX35Q5T0J7 233 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 FHL5Q5TD97 284 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 FAM180AQ6UWF9 173 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 RPS19BP1Q86WX3 136 aaKnown RBP16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF227Q86WZ6 799 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 LGI4Q8N135 537 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 SLC5A8Q8N695 610 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 EIF1ADQ8N9N8 165 aaKnown RBP16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 ST6GALNAC3Q8NDV1 305 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 PRR7Q8TB68 274 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF483Q8TF39 744 aaPredicted RBP16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 ANKRD9Q96BM1 317 aaPredicted RBP16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 MTBPQ96DY7 904 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 C1QTNF3Q9BXJ4 246 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 FETUBQ9UGM5 382 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 FBXW2Q9UKT8 454 aa16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 MRPS33Q9Y291 106 aaKnown RBP16.65■□□□□ 0.26
SBDSP1-202ENST00000423945 FOXO6A8MYZ6 492 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 PRKNO60260 465 aaPredicted RBP16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 EEDO75530 441 aaKnown RBP16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 WISP2O76076 250 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 SHBGP04278 402 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 MLF1P58340 268 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 TAS2R50P59544 299 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 SLAMF1Q13291 335 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 INAQ16352 499 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 LGSNQ5TDP6 509 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 MRM1Q6IN84 353 aaKnown RBP16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 PTPMT1Q8WUK0 201 aaPredicted RBP16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 RGMAQ96B86 450 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 SCMH1Q96GD3 660 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 ADAP2Q9NPF8 381 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 SEMA4BQ9NPR2 832 aaPredicted RBP16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 PSD3Q9NYI0 1048 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 PSMC3IPQ9P2W1 217 aaPredicted RBP16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 ZNF225Q9UK10 706 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 ATG4BQ9Y4P1 393 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 ICE1Q9Y2F5 2266 aa16.64■□□□□ 0.25
SBDSP1-202ENST00000423945 TRBV11-1A0A0K0K1C0 115 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 TMEM200CA6NKL6 621 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 FOXE1O00358 373 aaPredicted RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 TMPRSS11DO60235 418 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 PRKRAO75569 313 aaKnown RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 NEURL1O76050 574 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 EDN3P14138 238 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 TSPAN8P19075 237 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 PTX3P26022 381 aaPredicted RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 MST1P26927 711 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 TNFRSF8P28908 595 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 CCNG1P51959 295 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 ARFIP1P53367 373 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 CDH13P55290 713 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 IGLV3-21P80748 117 aaPredicted RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 PMP22Q01453 160 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 ID2Q02363 134 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 CUL3Q13618 768 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 OR1C1Q15619 314 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 ELAVL1Q15717 326 aaKnown RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 ZNF766Q5HY98 468 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 SPINK14Q6IE38 97 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 ZCCHC7Q8N3Z6 543 aaKnown RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 BCORP1Q8N888 145 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 OR4F6Q8NGB9 312 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 NCLNQ969V3 563 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 MTFMTQ96DP5 389 aaKnown RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 PSMG3-AS1Q96PY0 264 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 UTP23Q9BRU9 249 aaKnown RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 ALOXE3Q9BYJ1 711 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 ANKZF1Q9H8Y5 726 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 PRM3Q9NNZ6 103 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 OLAHQ9NV23 265 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 VTI1BQ9UEU0 232 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 TBK1Q9UHD2 729 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 ERRFI1Q9UJM3 462 aaPredicted RBP16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 PPT2Q9UMR5 302 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 PCDHGB6Q9Y5F9 930 aa16.63■□□□□ 0.25
SBDSP1-202ENST00000423945 SPTBN1Q01082 2364 aaKnown RBP16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 A0A0A6YYD5 115 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 IQANK1A0A1B0GTG1 560 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 A0A1W2PPM1 405 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 BLACEA4D250 179 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 GOLGA8RI6L899 631 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 FGF17O60258 216 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 DLX3O60479 287 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 AGFG2O95081 481 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 CPN2P22792 545 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 CLCN2P51788 898 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 RAP1GDS1P52306 607 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 RCN2Q14257 317 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 GGTA1PQ4G0N0 100 aa16.62■□□□□ 0.25
SBDSP1-202ENST00000423945 UNC50Q53HI1 259 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms