RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RB1P06400 928 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 ASGR2P07307 311 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 STSP08842 583 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 CCR3P51677 355 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 TUBA4AP68366 448 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 C16orf87Q6PH81 154 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 PDZD3Q86UT5 571 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 HIPK1Q86Z02 1210 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 OR4D11Q8NGI4 311 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 SLC28A3Q9HAS3 691 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 LHX9Q9NQ69 397 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 ITM2CQ9NQX7 267 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 GALNT8Q9NY28 637 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 RPS6KA6Q9UK32 745 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 SLC27A6Q9Y2P4 619 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 HAT1O14929 419 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 PI15O43692 258 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 SLC28A2O43868 658 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 TNNI3P19429 210 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 CD6P30203 668 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 BMXP51813 675 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 CYP2A13Q16696 494 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 ARHGAP22Q7Z5H3 698 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 SLC38A5Q8WUX1 472 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 TM4SF18Q96CE8 201 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 TMEM19Q96HH6 336 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 DOHHQ9BU89 302 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 CLDND1Q9NY35 253 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 ASIC5Q9NY37 505 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 MAFFQ9ULX9 164 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 LYVE1Q9Y5Y7 322 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 A0A0J9YVX5 310 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 TSPAN11A1L157 253 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 H0YAE9 185 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 H3BN98 237 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 SEMA7AO75326 666 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 RASGRP1O95267 797 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 BCL10O95999 233 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 EGFP01133 1207 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 GASTP01350 101 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 DNTTP04053 509 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 ADRA2AP08913 450 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 CKMT1AP12532 417 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 CALRP27797 417 aaKnown RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 MAGEA10P43363 369 aaPredicted RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 EMP3P54852 163 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 LIM2P55344 173 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 TMEM196Q5HYL7 178 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 KHDRBS2Q5VWX1 349 aaKnown RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 FAM71E1Q6IPT2 247 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 TMEM107Q6UX40 140 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 P3H2Q8IVL5 708 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 ENTHD1Q8IYW4 607 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 AMER2Q8N7J2 671 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 AQP11Q8NBQ7 271 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 OR52E1Q8NGJ3 308 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 OR13F1Q8NGS4 319 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 RLN3Q8WXF3 142 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 EFCAB11Q9BUY7 163 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 TM9SF3Q9HD45 589 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 TBC1D29Q9UFV1 150 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 ATG4BQ9Y4P1 393 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 SLCO1B1Q9Y6L6 691 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 A0A1W2PPV9 198 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 ANHXE9PGG2 379 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 KLF8O95600 359 aaPredicted RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 BCL6P41182 706 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 ASMTP46597 345 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 SELENOWP63302 87 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 MAP4K2Q12851 820 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 PUM1Q14671 1186 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 ZNF658BQ4V348 819 aaPredicted RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 NDUFAF5Q5TEU4 345 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 ANKRD54Q6NXT1 300 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 ZC3H14Q6PJT7 736 aaKnown RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 NEK10Q6ZWH5 1172 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 C6orf120Q7Z4R8 191 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 DCUN1D3Q8IWE4 304 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 TMIEQ8NEW7 156 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 OR5K2Q8NHB8 316 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 OTULINQ96BN8 352 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 TMEM168Q9H0V1 697 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 C1GALT1Q9NS00 363 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 RNF6Q9Y252 685 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 FAM32AQ9Y421 112 aaKnown RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 PCDHGA10Q9Y5H3 936 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 GPR37L1O60883 481 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 NDUFS2O75306 463 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 WBP4O75554 376 aaKnown RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 FGF19O95750 216 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 APODP05090 189 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 FPR1P21462 350 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 KELP23276 732 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 BUD31P41223 144 aaPredicted RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 NCBP2P52298 156 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 PHEXP78562 749 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 DCTN2Q13561 401 aaKnown RBP11.34□□□□□ -0.59
PTPRN-204ENST00000423636 DOC2BQ14184 412 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 LRRC32Q14392 662 aa11.34□□□□□ -0.59
PTPRN-204ENST00000423636 KDM4DQ6B0I6 523 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms