RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SLC13A2Q13183 592 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 TOR1AIP1Q5JTV8 583 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 FBXW10Q5XX13 1052 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 MAATS1Q7Z4T9 603 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 KIF18BQ86Y91 864 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 TXLNBQ8N3L3 684 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 RNF10Q8N5U6 811 aaKnown RBP15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 OR5L2Q8NGL0 311 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 PTPMT1Q8WUK0 201 aaPredicted RBP15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 FBXL8Q96CD0 374 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 AIF1LQ9BQI0 150 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 TSPY26PQ9H489 355 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 EXO5Q9H790 373 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 ZNF395Q9H8N7 513 aaPredicted RBP15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 SH2D2AQ9NP31 389 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 TAS2R13Q9NYV9 303 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 VTI1BQ9UEU0 232 aa15.44■□□□□ 0.06
CHCHD3-202ENST00000423635 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 KCNJ1P48048 391 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 STXBP1P61764 594 aaKnown RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 RNF4P78317 190 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 CCZ1BP86790 482 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 CCZ1P86791 482 aaPredicted RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 RBBP5Q15291 538 aaKnown RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 NXPE4Q6UWF7 544 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 TNIP2Q8NFZ5 429 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 GAL3ST3Q96A11 431 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 FAR2Q96K12 515 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 TRIM54Q9BYV2 358 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 C20orf96Q9NUD7 363 aaPredicted RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 QPCTLQ9NXS2 382 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 MRPS33Q9Y291 106 aaKnown RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 MAD1L1Q9Y6D9 718 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 RTTNQ86VV8 2226 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 CYR61O00622 381 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 CTNSO60931 367 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 RFPL3SP0C7P2 107 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 SORDQ00796 357 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 PCBP2Q15366 365 aaKnown RBP eCLIP15.43■□□□□ 0.068e-7■■■■□ 21.8
CHCHD3-202ENST00000423635 MPEG1Q2M385 716 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 PIGGQ5H8A4 983 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 SLC22A10Q63ZE4 541 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 ADGRD1Q6QNK2 874 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 CXXC5Q7LFL8 322 aaKnown RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 CXorf67Q86X51 503 aaPredicted RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 LRRC25Q8N386 305 aaPredicted RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 ZNF321PQ8N8H1 164 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 OR14A16Q8NHC5 309 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 NEIL3Q8TAT5 605 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 MS4A6EQ96DS6 147 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 LINGO1Q96FE5 620 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 COX4I2Q96KJ9 171 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 TSNARE1Q96NA8 513 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 NDNQ99608 321 aa15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 ZNF703Q9H7S9 590 aaPredicted RBP15.43■□□□□ 0.06
CHCHD3-202ENST00000423635 FBN1P35555 2871 aaKnown RBP15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 COL6A5A8TX70 2615 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 CLCA1A8K7I4 914 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 NRDCO43847 1150 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 HRGP04196 525 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 IFNA16P05015 189 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 PIGAP37287 484 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 TBL3Q12788 808 aaKnown RBP15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 ZNF791Q3KP31 576 aaPredicted RBP15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 HSP90AA5PQ58FG0 334 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 ANKRD22Q5VYY1 191 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 THOC6Q86W42 341 aaKnown RBP15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 C2CD4AQ8NCU7 369 aaPredicted RBP15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 MCUQ8NE86 351 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 LINC01560Q8TB33 94 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 PAQR8Q8TEZ7 354 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 NANOS1Q8WY41 292 aaKnown RBP15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 CAPZA3Q96KX2 299 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 QRFPRQ96P65 431 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 REPIN1Q9BWE0 567 aaKnown RBP15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 ALOXE3Q9BYJ1 711 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 ZFP64Q9NPA5 681 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 TRMT1Q9NXH9 659 aaKnown RBP15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 JKAMPQ9P055 326 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 DYRK1BQ9Y463 629 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 KCNE2Q9Y6J6 123 aa15.42■□□□□ 0.06
CHCHD3-202ENST00000423635 LRIT2A6NDA9 550 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 PABPN1LA6NDY0 278 aaKnown RBP15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 ARHGEF9O43307 516 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 B3GALT2O43825 422 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 IL2RAP01589 272 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 ENO2P09104 434 aaPredicted RBP15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 GABRB3P28472 473 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 ZNF136P52737 540 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 TERF1P54274 439 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 CDKN2DP55273 166 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 IL2P60568 153 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 KCTD19Q17RG1 926 aaPredicted RBP15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 ACSF3Q4G176 576 aaPredicted RBP15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 CLNKQ7Z7G1 428 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 TMPRSS11BQ86T26 416 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 LACC1Q8IV20 430 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 KLHDC8AQ8IYD2 350 aa15.41■□□□□ 0.06
CHCHD3-202ENST00000423635 LRRC75A-AS1Q8N1F1 130 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms