RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 RECQL5O94762 991 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LSM8O95777 96 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TGFAP01135 160 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RHOXF2BP0C7M4 288 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ACP2P11117 423 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ETS2P15036 469 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 HK1P19367 917 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CHMP24386 653 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SERPINB1P30740 379 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ASCL1P50553 236 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 NXPH1P58417 271 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PDCD1Q15116 288 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TRIP13Q15645 432 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PIGGQ5H8A4 983 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 HHATQ5VTY9 493 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ACSM2BQ68CK6 577 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GUSBP11Q6P575 273 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZCCHC12Q6PEW1 402 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 AGTRAPQ6RW13 159 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LIMS2Q7Z4I7 341 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM25Q86YD3 366 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RHOT2Q8IXI1 618 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OR13H1Q8NG92 308 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 FAM168AQ92567 244 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GTF3AQ92664 365 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 THRSPQ92748 146 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ASB9Q96DX5 294 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 THAP11Q96EK4 314 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 DIRC2Q96SL1 478 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RHOXF2Q9BQY4 288 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM109Q9BVC6 243 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CISHQ9NSE2 258 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ARL8BQ9NVJ2 186 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MRPL39Q9NYK5 338 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 L1RE1Q9UN81 338 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MAP4K5Q9Y4K4 846 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PTGDR2Q9Y5Y4 395 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZFYVE26Q68DK2 2539 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 IGSF10Q6WRI0 2623 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF840PA6NDX5 716 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 A6NHS1 94 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OR2AG2A6NM03 316 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 I6L893 689 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MRPL33O75394 65 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MTRF1O75570 445 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CSF2P04141 144 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 HIVEP1P15822 2718 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GABRG2P18507 467 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 IL1R2P27930 398 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 IFNGR2P38484 337 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RNF144AP50876 292 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ABCA4P78363 2273 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SMTNL2Q2TAL5 461 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 C9orf64Q5T6V5 341 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 NKAIN2Q5VXU1 208 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 IL20RBQ6UXL0 311 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 FAM151BQ6UXP7 276 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ADIPOR2Q86V24 386 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SGPP2Q8IWX5 399 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MAML2Q8IZL2 1156 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LGI4Q8N135 537 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CPXM2Q8N436 756 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SIRT6Q8N6T7 355 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 KDM1BQ8NB78 822 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OR8S1Q8NH09 359 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 OR4F5Q8NH21 305 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 DYNLRB2Q8TF09 96 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CT55Q8WUE5 264 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 C11orf40Q8WZ69 217 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SLC30A3Q99726 388 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ELOVL1Q9BW60 279 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 P2RY12Q9H244 342 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TRNAU1APQ9NX07 287 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 P4HTMQ9NXG6 502 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 TAS2R13Q9NYV9 303 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 MAT2BQ9NZL9 334 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ATXN10Q9UBB4 475 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 A0A1B0GX78 115 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RGSL1A5PLK6 1076 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF701M0R085 212 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CLDN5O00501 218 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SPRY1O43609 319 aaPredicted RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LIASO43766 372 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 NOL3O60936 208 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GOSR1O95249 250 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 FGF1P05230 155 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SPARCP09486 303 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 FURINP09958 794 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 CD79AP11912 226 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 LIFP15018 202 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 KIR3DL1P43629 444 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 GP2P55259 537 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 KIAA1024LP59773 190 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RAB10P61026 200 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 RPS7P62081 194 aaKnown RBP3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PPP2CBP62714 309 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 PPP2CAP67775 309 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 ART3Q13508 389 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SLC1A5Q15758 541 aa3.38□□□□□ -1.87
TOP2A-201ENST00000423485 SNAPC1Q16533 368 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms