RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 TUBBP07437 444 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 SP1P08047 785 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 NUDT17P0C025 328 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 MTHFD2P13995 350 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 ZNF10P21506 573 aaPredicted RBP14.17□□□□□ -0.14
USB1-202ENST00000423271 HSD17B7P56937 341 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 LAPTM5Q13571 262 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 PAGE2BQ5JRK9 111 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 SLC25A25Q6KCM7 469 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 TIFABQ6ZNK6 161 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.17□□□□□ -0.14
USB1-202ENST00000423271 TDRPQ86YL5 185 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 MREGQ8N565 214 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 TMEM178AQ8NBL3 297 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 ADAMTS18Q8TE60 1221 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 ZNF473Q8WTR7 871 aaKnown RBP14.17□□□□□ -0.14
USB1-202ENST00000423271 MZB1Q8WU39 189 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 NCLNQ969V3 563 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 GPR78Q96P69 363 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 DEFB126Q9BYW3 111 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 OPTCQ9UBM4 332 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 DAPP1Q9UN19 280 aa14.17□□□□□ -0.14
USB1-202ENST00000423271 LRRC14BA6NHZ5 514 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 FOXO6A8MYZ6 492 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 CLDN4O14493 209 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 PRKNO60260 465 aaPredicted RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 NME2P1O60361 137 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 PCNAP12004 261 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 NME2P22392 152 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 HPDP32754 393 aaPredicted RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 TRHRP34981 398 aaPredicted RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 CASP2P42575 452 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 CYB561P49447 251 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 CLCN2P51788 898 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 GPR143P51810 404 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 ALDH6A1Q02252 535 aaKnown RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 ACAP2Q15057 778 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 TERF2Q15554 542 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 MAPKAPK3Q16644 382 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 HIST2H2ACQ16777 129 aaPredicted RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 TECRLQ5HYJ1 363 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 HIST2H2AA3Q6FI13 130 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 SIAH3Q8IW03 269 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 ZNF595Q8IYB9 648 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 LAS2Q8IYD9 372 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 ARMC10Q8N2F6 343 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 RNF175Q8N4F7 328 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 HORMAD2Q8N7B1 307 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 SREK1Q8WXA9 508 aaKnown RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 GPR137Q96N19 417 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 KCNC2Q96PR1 638 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 MAPKAP1Q9BPZ7 522 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 TRIM45Q9H8W5 580 aaPredicted RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 PPCSQ9HAB8 311 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 PRM3Q9NNZ6 103 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 KCMF1Q9P0J7 381 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 FBXW2Q9UKT8 454 aa14.16□□□□□ -0.14
USB1-202ENST00000423271 PPIEQ9UNP9 301 aaKnown RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 MRPS33Q9Y291 106 aaKnown RBP14.16□□□□□ -0.14
USB1-202ENST00000423271 NPIPA5E9PKD4 350 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 SAP18O00422 153 aaKnown RBP14.15□□□□□ -0.14
USB1-202ENST00000423271 FCHO1O14526 889 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 ZNHIT1O43257 154 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 TGFB1P01137 390 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 COL6A2P12110 1019 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 ATP5A1P25705 553 aaKnown RBP14.15□□□□□ -0.14
USB1-202ENST00000423271 CA7P43166 264 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 HLCSP50747 726 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 TGM3Q08188 693 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 RASA2Q15283 850 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 RNFT1Q5M7Z0 435 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 GRHL2Q6ISB3 625 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 MED27Q6P2C8 311 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 C16orf47Q6ZP98 133 aaPredicted RBP14.15□□□□□ -0.14
USB1-202ENST00000423271 CPSF7Q8N684 471 aaKnown RBP14.15□□□□□ -0.14
USB1-202ENST00000423271 TEX9Q8N6V9 391 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 ACOT4Q8N9L9 421 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 OR7G3Q8NG95 312 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 RHEBL1Q8TAI7 183 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 VMP1Q96GC9 406 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 CCDC120Q96HB5 630 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 SCYL1Q96KG9 808 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 SORBS1Q9BX66 1292 aaKnown RBP14.15□□□□□ -0.14
USB1-202ENST00000423271 LIN28AQ9H9Z2 209 aaKnown RBP14.15□□□□□ -0.14
USB1-202ENST00000423271 ADAP2Q9NPF8 381 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 NPIPA1Q9UND3 350 aa14.15□□□□□ -0.14
USB1-202ENST00000423271 A0A1W2PPM1 405 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 TLDC2A0PJX2 215 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 SYCE1LA8MT33 242 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 GOLGA8RI6L899 631 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 CCL21O00585 134 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 SLC19A2O60779 497 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 CTNSO60931 367 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 LDB3O75112 727 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 CDH16O75309 829 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 ITGA10O75578 1167 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 IFNA16P05015 189 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 EPB42P16452 691 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 HSF1Q00613 529 aa14.14□□□□□ -0.15
USB1-202ENST00000423271 ID2Q02363 134 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms