RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SLC9B1P1A6NJY1 282 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PATE3B3GLJ2 98 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 C4orf51C9J302 202 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ARPC2O15144 300 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 GSTA4O15217 222 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 TOX3O15405 576 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 FLRT2O43155 660 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SIGLEC6O43699 453 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 TMPRSS11DO60235 418 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 MGRN1O60291 552 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 GPR37L1O60883 481 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 BCAS2O75934 225 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 KLHL18O94889 574 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PSMG1O95456 288 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CPSF4O95639 269 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CPNE6O95741 557 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 TBX6O95947 436 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 C9P02748 559 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 RPLP0P05388 317 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ABCB1P08183 1280 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ANKRD34CP0C6C1 535 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 LAMP1P11279 417 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PIM1P11309 404 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CD1EP15812 388 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ENGP17813 658 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 IL1RNP18510 177 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 TCN1P20061 433 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CPN2P22792 545 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PSMA4P25789 261 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PPP2R1BP30154 601 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 GPC1P35052 558 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CHI3L1P36222 383 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 LSSP48449 732 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ANXA11P50995 505 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 POLE2P56282 527 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 OR1D5P58170 312 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 AP2B1P63010 937 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SHC2P98077 582 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PLIN5Q00G26 463 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 LIPEQ05469 1076 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ABHD18Q0P651 414 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 HYAL2Q12891 473 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 TRAP1Q12931 704 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 FADDQ13158 208 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 GAB1Q13480 694 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CEACAM7Q14002 265 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 GRM7Q14831 915 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 RCN1Q15293 331 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SPDYE7PQ495Y7 208 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 DEFB134Q4QY38 66 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ZNF385BQ569K4 471 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 RABL3Q5HYI8 236 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 GARNL3Q5VVW2 1013 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 FRMPD2BQ6IN97 320 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 LCN8Q6JVE9 175 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 TMEM214Q6NUQ4 689 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ZFP1Q6P2D0 407 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 GUSBP11Q6P575 273 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ERICH5Q6P6B1 374 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PGM2L1Q6PCE3 622 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 WDR74Q6RFH5 385 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SZRD1Q7Z422 152 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SPATA24Q86W54 205 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 IFNEQ86WN2 208 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 DHFR2Q86XF0 187 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 GPR135Q8IZ08 494 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CLECL1Q8IZS7 167 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 EID2Q8N6I1 236 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 RNF148Q8N7C7 305 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 Q8N9G6 341 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 FAM47BQ8NA70 645 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 OR2T12Q8NG77 320 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 DNAJB14Q8TBM8 379 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 IFI44Q8TCB0 444 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SFXN5Q8TD22 340 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SLC26A7Q8TE54 656 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 UTP15Q8TED0 518 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 POP5Q969H6 163 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 CIDECQ96AQ7 238 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 MOAP1Q96BY2 351 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 REXO5Q96IC2 774 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SLC35G5Q96KT7 338 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 FCRL4Q96PJ5 515 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 BBS4Q96RK4 519 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 ECSITQ9BQ95 431 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SLC35A5Q9BS91 424 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 EFHD1Q9BUP0 239 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 NPLQ9BXD5 320 aaPredicted RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 PAIP1Q9H074 479 aaKnown RBP5.65□□□□□ -1.5
HMGB3-202ENST00000419110 RNPEPL1Q9HAU8 725 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 LYRM4Q9HD34 91 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SLC52A3Q9NQ40 469 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 LHX9Q9NQ69 397 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SERHLQ9NQF3 203 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 FSCN3Q9NQT6 498 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 SEMA3GQ9NS98 782 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 MS4A12Q9NXJ0 267 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 VAPAQ9P0L0 249 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 FTSJ1Q9UET6 329 aa5.65□□□□□ -1.5
HMGB3-202ENST00000419110 UTS2RQ9UKP6 389 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms