RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 TMEM154Q6P9G4 183 aa7.99□□□□□ -1.13
USP54-203ENST00000418501 ARMCX6Q7L4S7 300 aa7.99□□□□□ -1.13
USP54-203ENST00000418501 AMIGO2Q86SJ2 522 aa7.99□□□□□ -1.13
USP54-203ENST00000418501 MAFAQ8NHW3 353 aaPredicted RBP7.99□□□□□ -1.13
USP54-203ENST00000418501 ETAA1Q9NY74 926 aa7.99□□□□□ -1.13
USP54-203ENST00000418501 MYRFQ9Y2G1 1151 aa7.99□□□□□ -1.13
USP54-203ENST00000418501 MAP4K5Q9Y4K4 846 aa7.99□□□□□ -1.13
USP54-203ENST00000418501 SNX5Q9Y5X3 404 aa7.99□□□□□ -1.13
USP54-203ENST00000418501 H0YAE9 185 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 PLPP1O14494 284 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 BSGP35613 385 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 KCNC4Q03721 635 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 HSPB3Q12988 150 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 ZIC1Q15915 447 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 LRRC25Q8N386 305 aaPredicted RBP7.98□□□□□ -1.13
USP54-203ENST00000418501 CLDN23Q96B33 292 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 DOHHQ9BU89 302 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 SCN3BQ9NY72 215 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 CFL2Q9Y281 166 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 CA5BQ9Y2D0 317 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 OR2A25A4D2G3 310 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 M0R3G1 203 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 HAT1O14929 419 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 PRKD3O94806 890 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 RASAL1O95294 804 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 SYPP08247 313 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 HOXA6P31267 233 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 BCL6P41182 706 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 GPLD1P80108 840 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 DAG1Q14118 895 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 GRM7Q14831 915 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 OR2T5Q6IEZ7 315 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 ZNF425Q6IV72 752 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 MAMSTRQ6ZN01 415 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 DTWD1Q8N5C7 304 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 OR2T29Q8NH02 315 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 BAHD1Q8TBE0 780 aaPredicted RBP7.98□□□□□ -1.13
USP54-203ENST00000418501 ZFP90Q8TF47 636 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 PMM1Q92871 262 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 MS4A6EQ96DS6 147 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 INPP5KQ9BT40 448 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 DUSP15Q9H1R2 295 aaPredicted RBP7.98□□□□□ -1.13
USP54-203ENST00000418501 AGPAT4Q9NRZ5 378 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 SELENONQ9NZV5 590 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 RIMS3Q9UJD0 308 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 PLEKHM1Q9Y4G2 1056 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 SLC22A7Q9Y694 548 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 KIAA1549LQ6ZVL6 1849 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 LMO7DNF2Z398 122 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 RNH1P13489 461 aaKnown RBP7.98□□□□□ -1.13
USP54-203ENST00000418501 ANXA8P13928 327 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 IL9P15248 144 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 FPR1P21462 350 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 PSMB5P28074 263 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 TPP2P29144 1249 aaPredicted RBP7.98□□□□□ -1.13
USP54-203ENST00000418501 TTKP33981 857 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 ARSFP54793 590 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 C14orf28Q4W4Y0 310 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 KMT5CQ86Y97 462 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 SLC37A2Q8TED4 501 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 RMND5BQ96G75 393 aaPredicted RBP7.98□□□□□ -1.13
USP54-203ENST00000418501 AURKBQ96GD4 344 aaPredicted RBP7.98□□□□□ -1.13
USP54-203ENST00000418501 ART5Q96L15 291 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 SLC6A16Q9GZN6 736 aa7.98□□□□□ -1.13
USP54-203ENST00000418501 SCAMP1O15126 338 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 SOX11P35716 441 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 ALDH3A2P51648 485 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 CSNK2BP67870 215 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 IL1RL1Q01638 556 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 FXNQ16595 210 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 CEACAM20Q6UY09 585 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 ADGRF3Q8IZF5 1079 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 C8orf59Q8N0T1 100 aaPredicted RBP7.97□□□□□ -1.13
USP54-203ENST00000418501 ATG16L2Q8NAA4 619 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 PNPT1Q8TCS8 783 aaKnown RBP7.97□□□□□ -1.13
USP54-203ENST00000418501 NAT6Q93015 286 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 NEURL3Q96EH8 262 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 EGLN2Q96KS0 407 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 CNBD2Q96M20 576 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 NDEL1Q9GZM8 345 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 COQ10BQ9H8M1 238 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 SLC52A3Q9NQ40 469 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 ZNF624Q9P2J8 865 aaPredicted RBP7.97□□□□□ -1.13
USP54-203ENST00000418501 SEC14L3Q9UDX4 400 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 SERTAD3Q9UJW9 196 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 SAMHD1Q9Y3Z3 626 aaKnown RBP7.97□□□□□ -1.13
USP54-203ENST00000418501 C2orf16Q68DN1 1984 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 A0A1W2PPV9 198 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 TLCD2A6NGC4 264 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 H0Y8X5 98 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 H3BNX3 289 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 THRBP10828 461 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 BMP1P13497 986 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 MAGP20916 626 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 HOXD12P35452 270 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 GPR3P46089 330 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 FASLGP48023 281 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 PSMD4P55036 377 aaKnown RBP7.97□□□□□ -1.13
USP54-203ENST00000418501 STX4Q12846 297 aa7.97□□□□□ -1.13
USP54-203ENST00000418501 LARS2Q15031 903 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms