RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 MUM1Q2TAK8 710 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 TOR1AIP1Q5JTV8 583 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 BEND6Q5SZJ8 279 aaPredicted RBP16.84■□□□□ 0.29
VCP-202ENST00000417448 CEP85LQ5SZL2 805 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 TMIGD1Q6UXZ0 262 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 RIPOR1Q6ZS17 1223 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 DOLPP1Q86YN1 238 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 CAMKVQ8NCB2 501 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 OR52B6Q8NGF0 335 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 CREB3L4Q8TEY5 395 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 THAP11Q96EK4 314 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 FOXC2Q99958 501 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 HES7Q9BYE0 225 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 NOL11Q9H8H0 719 aaKnown RBP16.84■□□□□ 0.29
VCP-202ENST00000417448 IPPKQ9H8X2 491 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 ZBTB26Q9HCK0 441 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 SEMA4BQ9NPR2 832 aaPredicted RBP16.84■□□□□ 0.29
VCP-202ENST00000417448 ZFP69BQ9UJL9 534 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 PCTPQ9UKL6 214 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 RNF11Q9Y3C5 154 aa16.84■□□□□ 0.29
VCP-202ENST00000417448 IDSB3KWA1 339 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 G3V2L1 256 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 GLRA3O75311 464 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 ZNF888P0CJ79 500 aaPredicted RBP16.83■□□□□ 0.28
VCP-202ENST00000417448 PCNAP12004 261 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 ARL1P40616 181 aaPredicted RBP16.83■□□□□ 0.28
VCP-202ENST00000417448 EFNA3P52797 238 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 RAB8AP61006 207 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 OLR1P78380 273 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 HSF1Q00613 529 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 ZNF33BQ06732 778 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 FOXD4Q12950 439 aaPredicted RBP16.83■□□□□ 0.28
VCP-202ENST00000417448 PCOLCEQ15113 449 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 UNC50Q53HI1 259 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 KRTCAP3Q53RY4 240 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 ABHD17BQ5VST6 288 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 TMEM214Q6NUQ4 689 aaKnown RBP16.83■□□□□ 0.28
VCP-202ENST00000417448 TMEM200AQ86VY9 491 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 PDSS2Q86YH6 399 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 TBC1D19Q8N5T2 526 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 PTCD3Q96EY7 689 aaKnown RBP16.83■□□□□ 0.28
VCP-202ENST00000417448 TMEM109Q9BVC6 243 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 SARGQ9BW04 601 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 CAPS2Q9BXY5 557 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 RIC8BQ9NVN3 520 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 STMN3Q9NZ72 180 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 HCN3Q9P1Z3 774 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 SLC17A7Q9P2U7 560 aa16.83■□□□□ 0.28
VCP-202ENST00000417448 CCDC189A1A4V9 331 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 NPIPA5E9PKD4 350 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 STX16-NPEPL1H3BU86 382 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 STX16O14662 325 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 PLIN3O60664 434 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 ERLIN1O75477 346 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 TBX6O95947 436 aaPredicted RBP16.82■□□□□ 0.28
VCP-202ENST00000417448 TAC1P20366 129 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 FBLP22087 321 aaKnown RBP16.82■□□□□ 0.28
VCP-202ENST00000417448 CRHR1P34998 444 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 AHRP35869 848 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 EMP2P54851 167 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 TFF3Q07654 80 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 DDX39BQ13838 428 aaKnown RBP16.82■□□□□ 0.28
VCP-202ENST00000417448 SIAH3Q8IW03 269 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 KRT78Q8N1N4 520 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 RIBC1Q8N443 379 aaPredicted RBP16.82■□□□□ 0.28
VCP-202ENST00000417448 AMER3Q8N944 861 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 BANPQ8N9N5 519 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 CCDC63Q8NA47 563 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 OR5T3Q8NGG3 340 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 ATP6V1E2Q96A05 226 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 WDR34Q96EX3 536 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 FRMD6Q96NE9 622 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 SIGLEC12Q96PQ1 595 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 TMEM237Q96Q45 408 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 DRC3Q9H069 523 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 ACTR8Q9H981 624 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 NPIPA1Q9UND3 350 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 RPH3AQ9Y2J0 694 aaPredicted RBP16.82■□□□□ 0.28
VCP-202ENST00000417448 NAALAD2Q9Y3Q0 740 aa16.82■□□□□ 0.28
VCP-202ENST00000417448 TNPO3Q9Y5L0 923 aaKnown RBP16.82■□□□□ 0.28
VCP-202ENST00000417448 JMJD1CQ15652 2540 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 CCDC151A5D8V7 595 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 ASPDHA6ND91 283 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 OR2W5A6NFC9 320 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 E9PLN8 166 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 TXNDC9O14530 226 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 RGS16O15492 202 aaPredicted RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 RDH16O75452 317 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 RPS17P08708 135 aaKnown RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 SLC35G6P0C7Q6 338 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 ABOP16442 354 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 ATP5F1P24539 256 aaPredicted RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 CXCR2P25025 360 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 HNRNPH1P31943 449 aaKnown RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 CASP2P42575 452 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 CCT5P48643 541 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 ST13P50502 369 aaKnown RBP16.81■□□□□ 0.28
VCP-202ENST00000417448 NEK2P51955 445 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 CCNG1P51959 295 aa16.81■□□□□ 0.28
VCP-202ENST00000417448 PPP2R2AP63151 447 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms