RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SUZ12Q15022 739 aaKnown RBP16.07■□□□□ 0.16
CALD1-204ENST00000417172 TMPRSS9Q7Z410 1059 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 BMP8AQ7Z5Y6 402 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 SPRED1Q7Z699 444 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 PTRH1Q86Y79 214 aaKnown RBP16.07■□□□□ 0.16
CALD1-204ENST00000417172 OR2T12Q8NG77 320 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 ZFP90Q8TF47 636 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 TCTN2Q96GX1 697 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 RSRC1Q96IZ7 334 aaKnown RBP16.07■□□□□ 0.16
CALD1-204ENST00000417172 DPH2Q9BQC3 489 aaPredicted RBP16.07■□□□□ 0.16
CALD1-204ENST00000417172 CXorf36Q9H7Y0 433 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 TPT1P8Q9HAU6 139 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 ACTR3BQ9P1U1 418 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 STX18Q9P2W9 335 aaKnown RBP16.07■□□□□ 0.16
CALD1-204ENST00000417172 VPS4AQ9UN37 437 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 NAALAD2Q9Y3Q0 740 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 SNX13Q9Y5W8 968 aa16.07■□□□□ 0.16
CALD1-204ENST00000417172 AGRPO00253 132 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ARHGAP33O14559 1287 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 DUX1O43812 170 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 FKBP6O75344 327 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ERAL1O75616 437 aaKnown RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 ALPPL2P10696 532 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 SOAT1P35610 550 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 TSFMP43897 325 aaKnown RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 ARFIP1P53367 373 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 PCBP4P57723 403 aaKnown RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 AP2B1P63010 937 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 NR1D2Q14995 579 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.06■□□□□ 0.16
CALD1-204ENST00000417172 SLC23A3Q6PIS1 610 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 PRR23CQ6ZRP0 262 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ABHD13Q7L211 337 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 CALHM3Q86XJ0 350 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ARHGEF39Q8N4T4 335 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 NRG4Q8WWG1 115 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 SLCO4A1Q96BD0 722 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 FAM120BQ96EK7 910 aaKnown RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 ZDHHC12Q96GR4 267 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 SLC35A5Q9BS91 424 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ARRDC1-AS1Q9H2J1 176 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 RPF2Q9H7B2 306 aaKnown RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 KCMF1Q9P0J7 381 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 EPHA6Q9UF33 1036 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ATXN7L1Q9ULK2 861 aaPredicted RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 SLC6A14Q9UN76 642 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 WBP11Q9Y2W2 641 aaKnown RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 PCDHB3Q9Y5E6 796 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 SNX8Q9Y5X2 465 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 V9GYQ6 96 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 TCRBV3S1A0A5B6 114 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 SGK494L7N484 410 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ZSCAN9O15535 394 aaPredicted RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 TBX19O60806 448 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 C8BP07358 591 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 NUDT7P0C024 238 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 HOXD12P35452 270 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 CDK9P50750 372 aaKnown RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 CCT8P50990 548 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 HNRNPFP52597 415 aaKnown RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 LIM2P55344 173 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 FXNQ16595 210 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 SPATS1Q496A3 300 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 COX20Q5RI15 118 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 LCN8Q6JVE9 175 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 ANGPTL8Q6UXH0 198 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 GOT1L1Q8NHS2 421 aaPredicted RBP16.06■□□□□ 0.16
CALD1-204ENST00000417172 CEP76Q8TAP6 659 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 FIG4Q92562 907 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 LRGUKQ96M69 825 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 PHF12Q96QT6 1004 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 SERINC2Q96SA4 455 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 SH3GL1Q99961 368 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 DUSP23Q9BVJ7 150 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 FAIM2Q9BWQ8 316 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 RAB33BQ9H082 229 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 C11orf16Q9NQ32 467 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 GPATCH2Q9NW75 528 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 TAS2R9Q9NYW1 312 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 PCDHGB4Q9UN71 923 aa16.06■□□□□ 0.16
CALD1-204ENST00000417172 URADA6NGE7 173 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 DRD2P14416 443 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 MPLP40238 635 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 GPR3P46089 330 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 GSTM5P46439 218 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 MANFP55145 182 aaKnown RBP16.05■□□□□ 0.16
CALD1-204ENST00000417172 NR0B2Q15466 257 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 ZC3H12BQ5HYM0 836 aaKnown RBP16.05■□□□□ 0.16
CALD1-204ENST00000417172 GLYATQ6IB77 296 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 AAGABQ6PD74 315 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 ZNF655Q8N720 491 aaPredicted RBP16.05■□□□□ 0.16
CALD1-204ENST00000417172 OR9A4Q8NGU2 314 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 CNRIP1Q96F85 164 aaPredicted RBP16.05■□□□□ 0.16
CALD1-204ENST00000417172 SLC35C2Q9NQQ7 365 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 ZNF282Q9UDV7 671 aaPredicted RBP16.05■□□□□ 0.16
CALD1-204ENST00000417172 CES1P1Q9UKY3 287 aa16.05■□□□□ 0.16
CALD1-204ENST00000417172 EVPLLA8MZ36 301 aa16.04■□□□□ 0.16
CALD1-204ENST00000417172 B3GALT2O43825 422 aa16.04■□□□□ 0.16
CALD1-204ENST00000417172 GALR3O60755 368 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms