RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 SSR2P43308 183 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 ALDH18A1P54886 795 aaKnown RBP23.29■■□□□ 1.32
HLA-C-204ENST00000415537 DDX39BQ13838 428 aaKnown RBP23.29■■□□□ 1.32
HLA-C-204ENST00000415537 NAA30Q147X3 362 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-204ENST00000415537 KHDRBS2Q5VWX1 349 aaKnown RBP23.29■■□□□ 1.32
HLA-C-204ENST00000415537 LIPJQ5W064 366 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 MTFR2Q6P444 385 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 ZNF793Q6ZN11 406 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 UBE3DQ7Z6J8 389 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 RELL1Q8IUW5 271 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 MAGED4Q96JG8 741 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 MAPKAP1Q9BPZ7 522 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 KCMF1Q9P0J7 381 aa23.29■■□□□ 1.32
HLA-C-204ENST00000415537 SAP18O00422 153 aaKnown RBP23.28■■□□□ 1.32
HLA-C-204ENST00000415537 SLC19A2O60779 497 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 ACSL3O95573 720 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 INHBAP08476 426 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 TNNI3P19429 210 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 CPN2P22792 545 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 GPR143P51810 404 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 RAP1GDS1P52306 607 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 PHEXP78562 749 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 SERTAD2Q14140 314 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 DEPDC1Q5TB30 811 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 CYP4Z2PQ8N1L4 340 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 C7orf57Q8NEG2 295 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 FMO2Q99518 471 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 OR51B5Q9H339 312 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 CDC42EP4Q9H3Q1 356 aaKnown RBP23.28■■□□□ 1.32
HLA-C-204ENST00000415537 ACTR8Q9H981 624 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 CPSF2Q9P2I0 782 aaKnown RBP23.28■■□□□ 1.32
HLA-C-204ENST00000415537 VTI1BQ9UEU0 232 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 DMGDHQ9UI17 866 aaKnown RBP23.28■■□□□ 1.32
HLA-C-204ENST00000415537 ZNF223Q9UK11 482 aaPredicted RBP23.28■■□□□ 1.32
HLA-C-204ENST00000415537 KLF13Q9Y2Y9 288 aaPredicted RBP23.28■■□□□ 1.32
HLA-C-204ENST00000415537 YARS2Q9Y2Z4 477 aaKnown RBP23.28■■□□□ 1.32
HLA-C-204ENST00000415537 PCDHGA11Q9Y5H2 935 aa23.28■■□□□ 1.32
HLA-C-204ENST00000415537 TNPO3Q9Y5L0 923 aaKnown RBP23.28■■□□□ 1.32
HLA-C-204ENST00000415537 MYOCOSA0A1B0GUC4 107 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 KLRC4-KLRK1H3BQV0 150 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 LDB3O75112 727 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 WISP2O76076 250 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 ALDOAP04075 364 aaKnown RBP23.27■■□□□ 1.32
HLA-C-204ENST00000415537 ZNF24P17028 368 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 PIK3CBP42338 1070 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 SSR4P51571 173 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 OR4C11Q6IEV9 310 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 TAOK1Q7L7X3 1001 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 ZNF227Q86WZ6 799 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 CPSF7Q8N684 471 aaKnown RBP23.27■■□□□ 1.32
HLA-C-204ENST00000415537 MORN4Q8NDC4 146 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 OR14A16Q8NHC5 309 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 HUS1BQ8NHY5 278 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 RGMAQ96B86 450 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 REPS1Q96D71 796 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 CACNA1DQ01668 2161 aa23.27■■□□□ 1.32
HLA-C-204ENST00000415537 ASNA1O43681 348 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 CTAGE8P0CG41 777 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 ESRRAP11474 423 aaPredicted RBP23.26■■□□□ 1.31
HLA-C-204ENST00000415537 PIK3CGP48736 1102 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 GTF2H2Q13888 395 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 PCBP2Q15366 365 aaKnown RBP eCLIP23.26■■□□□ 1.31
HLA-C-204ENST00000415537 GLE1Q53GS7 698 aaKnown RBP23.26■■□□□ 1.31
HLA-C-204ENST00000415537 GTF2H2CQ6P1K8 395 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 CTAGE4Q8IX94 777 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 SLC44A1Q8WWI5 657 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 CCDC120Q96HB5 630 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 MTERF1Q99551 399 aaKnown RBP23.26■■□□□ 1.31
HLA-C-204ENST00000415537 IPPKQ9H8X2 491 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 MS4A12Q9NXJ0 267 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 ERVK-11Q9UQG0 969 aa23.26■■□□□ 1.31
HLA-C-204ENST00000415537 C17orf105B2RV13 164 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 KLK8O60259 260 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 UGDHO60701 494 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 SCELO95171 688 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 SERPINB9P50453 376 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 SLAMF1Q13291 335 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 UBAP2Q5T6F2 1119 aaKnown RBP23.25■■□□□ 1.31
HLA-C-204ENST00000415537 HSDL2Q6YN16 418 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 SPPL2CQ8IUH8 684 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 SLC34A3Q8N130 599 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 GHDCQ8N2G8 530 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 RNF175Q8N4F7 328 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 POGLUT1Q8NBL1 392 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 NOA1Q8NC60 698 aaKnown RBP23.25■■□□□ 1.31
HLA-C-204ENST00000415537 PTPMT1Q8WUK0 201 aaPredicted RBP23.25■■□□□ 1.31
HLA-C-204ENST00000415537 GPR78Q96P69 363 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 FUT8Q9BYC5 575 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 OR8D2Q9GZM6 311 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 DMRT3Q9NQL9 472 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 TSC22D4Q9Y3Q8 395 aa23.25■■□□□ 1.31
HLA-C-204ENST00000415537 GTF3C1Q12789 2109 aa23.24■■□□□ 1.31
HLA-C-204ENST00000415537 LRRC14BA6NHZ5 514 aa23.24■■□□□ 1.31
HLA-C-204ENST00000415537 A8MVJ9 347 aa23.24■■□□□ 1.31
HLA-C-204ENST00000415537 PRKNO60260 465 aaPredicted RBP23.24■■□□□ 1.31
HLA-C-204ENST00000415537 RBP1P09455 135 aa23.24■■□□□ 1.31
HLA-C-204ENST00000415537 COX7A2P14406 83 aa23.24■■□□□ 1.31
HLA-C-204ENST00000415537 PTX3P26022 381 aaPredicted RBP23.24■■□□□ 1.31
HLA-C-204ENST00000415537 TLX1P31314 330 aaPredicted RBP23.24■■□□□ 1.31
HLA-C-204ENST00000415537 ARL1P40616 181 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms