RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SPNS1Q9H2V7 528 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 KLHL31Q9H511 634 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 ELOVL6Q9H5J4 265 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 NOL11Q9H8H0 719 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 DMRT3Q9NQL9 472 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 MKS1Q9NXB0 559 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PTGFRNQ9P2B2 879 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CPSF2Q9P2I0 782 aaKnown RBP5.99□□□□□ -1.45
USP54-202ENST00000413442 PCTPQ9UKL6 214 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 CFL2Q9Y281 166 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 PCDHGA10Q9Y5H3 936 aa5.99□□□□□ -1.45
USP54-202ENST00000413442 ZFYVE26Q68DK2 2539 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 A0A1B0GUH1 482 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 C1orf226A1L170 272 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 GOLGA6L10A6NI86 522 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 OR6C76A6NM76 312 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 A8MUI8 341 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 OR7A17O14581 309 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 PRAMEF4O60810 478 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 JRKO75564 520 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 SEC24DO94855 1032 aaPredicted RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 SUPT7LO94864 414 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 SLITRK5O94991 958 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 SOX30O94993 753 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 RASAL1O95294 804 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 CBX6O95503 412 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 ESRRBO95718 433 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 GPR75O95800 540 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 TBX6O95947 436 aaPredicted RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 TGFB1P01137 390 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 RPS17P08708 135 aaKnown RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 FAM58BPP0C7Q3 252 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 SLC35E2P0CK97 266 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 MYL2P10916 166 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 ITGAMP11215 1152 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 PCNAP12004 261 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 DRD2P14416 443 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 DDX5P17844 614 aaKnown RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 TNNI3P19429 210 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 GCAP28676 217 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 HLCSP50747 726 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 GPR143P51810 404 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 BTG2P78543 158 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 IRF9Q00978 393 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 EEF1A2Q05639 463 aaKnown RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 SLC18A2Q05940 514 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 LCP2Q13094 533 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 HEPACAMQ14CZ8 416 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 ZRSR2Q15696 482 aaKnown RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 MPEG1Q2M385 716 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 C18orf21Q32NC0 220 aaPredicted RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 ZNF678Q5SXM1 525 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 TEX35Q5T0J7 233 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 FAM69BQ5VUD6 431 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 PRAMEF9Q5VWM5 478 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 FAAH2Q6GMR7 532 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 SLC25A25Q6KCM7 469 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 GALNT18Q6P9A2 607 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 PAOXQ6QHF9 649 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 OPN5Q6U736 354 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 HSDL2Q6YN16 418 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 SH2D5Q6ZV89 423 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 VN1R5Q7Z5H4 357 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 MYLK4Q86YV6 388 aaPredicted RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 PLD6Q8N2A8 252 aaKnown RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 METTL4Q8N3J2 472 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 MREGQ8N565 214 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 APCDD1LQ8NCL9 501 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 C17orf47Q8NEP4 570 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 OR5T3Q8NGG3 340 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 NUBPLQ8TB37 319 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 BRIX1Q8TDN6 353 aaKnown RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 ZNF483Q8TF39 744 aaPredicted RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 THAP3Q8WTV1 239 aaPredicted RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 UBLCP1Q8WVY7 318 aaPredicted RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 TP53INP1Q96A56 240 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 ERP27Q96DN0 273 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 PHF21BQ96EK2 531 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 DTNBP1Q96EV8 351 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 CNDP1Q96KN2 507 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 ZNF382Q96SR6 550 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 FAIM2Q9BWQ8 316 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 IQCGQ9H095 443 aaKnown RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP54-202ENST00000413442 RPF2Q9H7B2 306 aaKnown RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 HHATLQ9HCP6 504 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 PRM3Q9NNZ6 103 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 NECTIN3Q9NQS3 549 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 PLSCR2Q9NRY7 297 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 TMEM216Q9P0N5 145 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 XPR1Q9UBH6 696 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 VPS29Q9UBQ0 182 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 COPS7AQ9UBW8 275 aa5.98□□□□□ -1.45
USP54-202ENST00000413442 KLF13Q9Y2Y9 288 aaPredicted RBP5.98□□□□□ -1.45
USP54-202ENST00000413442 PCSK5Q92824 1860 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 A0A0A6YYD5 115 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 ASPDHA6ND91 283 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 A8MT66 165 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 ESPNB1AK53 854 aa5.97□□□□□ -1.45
USP54-202ENST00000413442 NPIPB8E9PQR5 432 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms