RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SPOPO43791 374 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 PRICKLE3O43900 615 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 MFSD11O43934 449 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 AVILO75366 819 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ZMPSTE24O75844 475 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ALDH1A2O94788 518 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CD160O95971 181 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 GBAP04062 536 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SHBGP04278 402 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SRPRAP08240 638 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 RPS17P08708 135 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 T-ENOLP0DO92 83 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 UQCRBP14927 111 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 COMTP21964 271 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 PRDX6P30041 224 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 HOXA6P31267 233 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SSTR4P31391 388 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 GKP32189 559 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CSF2RBP32927 897 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SOAT1P35610 550 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 P2RY2P41231 377 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ALDH3B2P48448 385 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CAMPP49913 170 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 DNA2P51530 1060 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ARSEP51690 589 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CHN2P52757 468 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 PLK1P53350 603 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 AP2S1P53680 142 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 PNLIPRP2P54317 469 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 AIF1P55008 147 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 PLTPP55058 493 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 MAGOHP61326 146 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 RAD51Q06609 339 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 EGR3Q06889 387 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 C2orf54Q08AI8 447 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 DPYSL3Q14195 570 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 OXA1LQ15070 435 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SF3B4Q15427 424 aaKnown RBP eCLIP4.37□□□□□ -1.717e-8■■■■□ 22.4
SF3B1-202ENST00000409915 DLG2Q15700 870 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 STK11Q15831 433 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 DUSP7Q16829 419 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 LSM12Q3MHD2 195 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 PLK5Q496M5 336 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CCDC58Q4VC31 144 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 RBM20Q5T481 1227 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 C9orf64Q5T6V5 341 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ARHGAP40Q5TG30 622 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 AFMIDQ63HM1 303 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 KANK2Q63ZY3 851 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF776Q68DI1 518 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 C22orf39Q6P5X5 142 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 AAGABQ6PD74 315 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 RBM44Q6ZP01 1051 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 POLNQ7Z5Q5 900 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SATL1Q86VE3 508 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 TMPRSS6Q8IU80 811 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 TMEFF1Q8IYR6 380 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ELMOD2Q8IZ81 293 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 OR4N4Q8N0Y3 316 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF557Q8N988 423 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SUMF1Q8NBK3 374 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 MCUQ8NE86 351 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 OR52M1Q8NGK5 317 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 OR6K2Q8NGY2 324 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 OR2T3Q8NH03 318 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 MBD3L2Q8NHZ7 208 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 MDM1Q8TC05 714 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 GANCQ8TET4 914 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 NKD2Q969F2 451 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 MAGOHBQ96A72 148 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CIDECQ96AQ7 238 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SGK3Q96BR1 496 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 FAM122AQ96E09 287 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 PLEKHA8Q96JA3 519 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 WDR92Q96MX6 357 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CAMK1GQ96NX5 476 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 MROQ9BYG7 248 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CEP41Q9BYV8 373 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SLC39A8Q9C0K1 460 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 STMN4Q9H169 189 aaPredicted RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 HRH4Q9H3N8 390 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 RIBC2Q9H4K1 309 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CATSPERBQ9H7T0 1116 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 MARCH7Q9H992 704 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CARS2Q9HA77 564 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 NGBQ9NPG2 151 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 DTLQ9NZJ0 730 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 JKAMPQ9P055 326 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 ANKMY1Q9P2S6 941 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SERGEFQ9UGK8 458 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 TLK1Q9UKI8 766 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 FBXW2Q9UKT8 454 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 GRID1Q9ULK0 1009 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 STK38LQ9Y2H1 464 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 STRAPQ9Y3F4 350 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CHTOPQ9Y3Y2 248 aaKnown RBP4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CSNK1G3Q9Y6M4 447 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 CKAP5Q14008 2032 aa4.37□□□□□ -1.71
SF3B1-202ENST00000409915 SDK1Q7Z5N4 2213 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms