RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CNTFP26441 200 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 EEF1DP29692 281 aaKnown RBP16.52■□□□□ 0.24
LSM5-204ENST00000409909 KCNK10P57789 538 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 OC90Q02509 493 aaPredicted RBP16.52■□□□□ 0.24
LSM5-204ENST00000409909 CPSF6Q16630 551 aaKnown RBP eCLIP16.52■□□□□ 0.24
LSM5-204ENST00000409909 FAM153CQ494X1 144 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 HIST2H2BCQ6DN03 193 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 OR4C11Q6IEV9 310 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 METTL2BQ6P1Q9 378 aaKnown RBP16.52■□□□□ 0.24
LSM5-204ENST00000409909 TMEM151AQ8N4L1 468 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 L3MBTL4Q8NA19 623 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 THAP3Q8WTV1 239 aaPredicted RBP16.52■□□□□ 0.24
LSM5-204ENST00000409909 NCLNQ969V3 563 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 SCYL1Q96KG9 808 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 RHOXF2Q9BQY4 288 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 ALOXE3Q9BYJ1 711 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 DEFB126Q9BYW3 111 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 NOL11Q9H8H0 719 aaKnown RBP16.52■□□□□ 0.24
LSM5-204ENST00000409909 PRM3Q9NNZ6 103 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 ADAP2Q9NPF8 381 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 LRFN1Q9P244 771 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 XPR1Q9UBH6 696 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 PCDHGA11Q9Y5H2 935 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 CELSR2Q9HCU4 2923 aa16.52■□□□□ 0.23
LSM5-204ENST00000409909 EXOC1LA0A1B0GW35 172 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 PLPP1O14494 284 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 LRRTM2O43300 516 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 RIPK2O43353 540 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 LDB3O75112 727 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 CRYABP02511 175 aaKnown RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 SP1P08047 785 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 ABHD2P08910 425 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 SBK3P0C264 359 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 TRHRP34981 398 aaPredicted RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 SSR2P43308 183 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 CLCN2P51788 898 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 NEK2P51955 445 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 RPS13P62277 151 aaKnown RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 SLAMF1Q13291 335 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 RCN2Q14257 317 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 ELAVL1Q15717 326 aaKnown RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 TRMT10CQ7L0Y3 403 aaKnown RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 OR52B6Q8NGF0 335 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 WDR20Q8TBZ3 569 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 PTPMT1Q8WUK0 201 aaPredicted RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 RGMAQ96B86 450 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 ANKRD9Q96BM1 317 aaPredicted RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 C5orf34Q96MH7 638 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 NSUN5Q96P11 429 aaKnown RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 CDK15Q96Q40 435 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 ZNF717Q9BY31 904 aaPredicted RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 TXLNGYQ9BZA5 131 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 TRIM45Q9H8W5 580 aaPredicted RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 ZBTB26Q9HCK0 441 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 VTI1BQ9UEU0 232 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 PLEKHB1Q9UF11 243 aaPredicted RBP16.51■□□□□ 0.23
LSM5-204ENST00000409909 PCTPQ9UKL6 214 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 FBXW2Q9UKT8 454 aa16.51■□□□□ 0.23
LSM5-204ENST00000409909 STX16-NPEPL1H3BU86 382 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 STX16O14662 325 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 PRKNO60260 465 aaPredicted RBP16.5■□□□□ 0.23
LSM5-204ENST00000409909 ETHE1O95571 254 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 IFNA16P05015 189 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 SNRPAP09012 282 aaKnown RBP16.5■□□□□ 0.23
LSM5-204ENST00000409909 CD46P15529 392 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 PTX3P26022 381 aaPredicted RBP16.5■□□□□ 0.23
LSM5-204ENST00000409909 PIK3CGP48736 1102 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 ID2Q02363 134 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
LSM5-204ENST00000409909 TSNAXIP1Q2TAA8 658 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 C4orf17Q53FE4 359 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 TRIM44Q96DX7 344 aaPredicted RBP16.5■□□□□ 0.23
LSM5-204ENST00000409909 VMP1Q96GC9 406 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 MRPL57Q9BQC6 102 aaKnown RBP16.5■□□□□ 0.23
LSM5-204ENST00000409909 EPB41L4BQ9H329 900 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 TMCO1Q9UM00 188 aa16.5■□□□□ 0.23
LSM5-204ENST00000409909 A1L4Q6 167 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 ASPDHA6ND91 283 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 TMEM200CA6NKL6 621 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 CDK2AP1O14519 115 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 EEDO75530 441 aaKnown RBP16.49■□□□□ 0.23
LSM5-204ENST00000409909 SLC25A12O75746 678 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 CLDN9O95484 217 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 STSP08842 583 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 CPN2P22792 545 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 CYB561P49447 251 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 HLCSP50747 726 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 RAP1GDS1P52306 607 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 STX4Q12846 297 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 SLC25A25Q6KCM7 469 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 ADGRD1Q6QNK2 874 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 GFRALQ6UXV0 394 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 TIFABQ6ZNK6 161 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 C16orf47Q6ZP98 133 aaPredicted RBP16.49■□□□□ 0.23
LSM5-204ENST00000409909 RPS27LQ71UM5 84 aaKnown RBP16.49■□□□□ 0.23
LSM5-204ENST00000409909 GALNTL5Q7Z4T8 443 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 OR4N5Q8IXE1 308 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 TMEM132CQ8N3T6 1108 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 HORMAD2Q8N7B1 307 aa16.49■□□□□ 0.23
LSM5-204ENST00000409909 ZNF321PQ8N8H1 164 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms