RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 PRAMEF25A6NGN4 478 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 NDUFV2P19404 249 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 TNFRSF1BP20333 461 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 SSR2P43308 183 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 RPS6KA3P51812 740 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 KEAP1Q14145 624 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 SKIV2LQ15477 1246 aaKnown RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 BROXQ5VW32 411 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 KIAA1324Q6UXG2 1013 aaKnown RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 TRIM69Q86WT6 500 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 CLVS1Q8IUQ0 354 aaPredicted RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 SLC30A8Q8IWU4 369 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 TMEM145Q8NBT3 493 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 UCN3Q969E3 161 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 RIBC2Q9H4K1 309 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 CXorf21Q9HAI6 301 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 ANGPT4Q9Y264 503 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 ZNF701M0R085 212 aaPredicted RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 KDM1AO60341 852 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 ABCB7O75027 752 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 TRMUO75648 421 aaKnown RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 AGXTP21549 392 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 AK4P27144 223 aaPredicted RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 GSTM2P28161 218 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 AHRP35869 848 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 CLK3P49761 638 aaKnown RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 GABARAPL2P60520 117 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 HSPB3Q12988 150 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 SIM2Q14190 667 aaPredicted RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 CEACAM20Q6UY09 585 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 WASH2PQ6VEQ5 465 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 ATG16L2Q8NAA4 619 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 ISOC1Q96CN7 298 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 MS4A6EQ96DS6 147 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 ZBED6CLQ96FA7 236 aaPredicted RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 WDR92Q96MX6 357 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 MACROD1Q9BQ69 325 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 C8orf33Q9H7E9 229 aaPredicted RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 THSD1Q9NS62 852 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 ACSS1Q9NUB1 689 aaPredicted RBP19.12■□□□□ 0.65
USP39-204ENST00000409766 SNX11Q9Y5W9 270 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 LYVE1Q9Y5Y7 322 aa19.12■□□□□ 0.65
USP39-204ENST00000409766 C4orf51C9J302 202 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 B4GALT2O60909 372 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 IFNA14P01570 189 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 CYP4B1P13584 511 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 DRD2P14416 443 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 JUNBP17275 347 aaPredicted RBP19.11■□□□□ 0.65
USP39-204ENST00000409766 OR1E2P47887 323 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 TPMTP51580 245 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 IL1RL1Q01638 556 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 CDK5R2Q13319 367 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 TOP3AQ13472 1001 aaPredicted RBP19.11■□□□□ 0.65
USP39-204ENST00000409766 LRRC32Q14392 662 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 MLC1Q15049 377 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 NEDD8Q15843 81 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 NDUFAF5Q5TEU4 345 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 HORMAD2Q8N7B1 307 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 RPLP0P6Q8NHW5 317 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 PSMA8Q8TAA3 256 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 JPH3Q8WXH2 748 aaPredicted RBP19.11■□□□□ 0.65
USP39-204ENST00000409766 SGCDQ92629 289 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 ZNF347Q96SE7 839 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 TUBA1CQ9BQE3 449 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 KRT84Q9NSB2 600 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 EXD2Q9NVH0 621 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 KIF17Q9P2E2 1029 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 BLOC1S6Q9UL45 172 aa19.11■□□□□ 0.65
USP39-204ENST00000409766 ADAMDEC1O15204 470 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 APBB3O95704 486 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 STATHP02808 62 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 RPS26P62854 115 aaKnown RBP19.1■□□□□ 0.65
USP39-204ENST00000409766 SFSWAPQ12872 951 aaKnown RBP19.1■□□□□ 0.65
USP39-204ENST00000409766 KIAA1614Q5VZ46 1190 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 REEP3Q6NUK4 255 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 AMIGO1Q86WK6 493 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 TTC29Q8NA56 475 aaPredicted RBP19.1■□□□□ 0.65
USP39-204ENST00000409766 SETD9Q8NE22 299 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 TSACCQ96A04 125 aaPredicted RBP19.1■□□□□ 0.65
USP39-204ENST00000409766 ZNF300Q96RE9 604 aaPredicted RBP19.1■□□□□ 0.65
USP39-204ENST00000409766 A4GALTQ9NPC4 353 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 PRDM7Q9NQW5 492 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 EHD3Q9NZN3 535 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 OR6C2Q9NZP2 312 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 ZNF624Q9P2J8 865 aaPredicted RBP19.1■□□□□ 0.65
USP39-204ENST00000409766 PCOLCE2Q9UKZ9 415 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 PNMA8BQ9ULN7 279 aaPredicted RBP19.1■□□□□ 0.65
USP39-204ENST00000409766 CDC14AQ9UNH5 594 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 TESMINQ9Y4I5 508 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 HSPE1-MOB4S4R3N1 261 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 SLC1A7O00341 560 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 HTR1AP08908 422 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 HNRNPA2B1P22626 353 aaKnown RBP19.1■□□□□ 0.65
USP39-204ENST00000409766 CMPK1P30085 196 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 TCEA2Q15560 299 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 XAF1Q6GPH4 301 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 ZNF425Q6IV72 752 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 RD3Q7Z3Z2 195 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 C6orf120Q7Z4R8 191 aa19.1■□□□□ 0.65
USP39-204ENST00000409766 ARMC8Q8IUR7 673 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms