RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 DSELQ8IZU8 1212 aa15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 SLC38A9Q8NBW4 561 aa15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 GBP5Q96PP8 586 aa15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 C1orf50Q9BV19 199 aa15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 EBPLQ9BY08 206 aa15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 GPN2Q9H9Y4 310 aaPredicted RBP15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 DAPP1Q9UN19 280 aa15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 MAPRE3Q9UPY8 281 aa15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 MAP4K5Q9Y4K4 846 aa15.61■□□□□ 0.09
TSPAN4-208ENST00000409531 SETXQ7Z333 2677 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 SCN2AQ99250 2005 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 GCN1Q92616 2671 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 ZNF860A6NHJ4 632 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 E9PBE3 544 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 KLHL41O60662 606 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 RDH16O75452 317 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 B3GALT4O96024 378 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 GBAP04062 536 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 BCKDHAP12694 445 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 RNH1P13489 461 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 IDO1P14902 403 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 WT1P19544 449 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 IL10P22301 178 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 TLX1P31314 330 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 BUD31P41223 144 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 STAT5AP42229 794 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 SNRPNP63162 240 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 GSTA3Q16772 222 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 NKAIN1Q4KMZ8 207 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 C1orf189Q5VU69 101 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 MRM1Q6IN84 353 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 IKBIPQ70UQ0 350 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 GPR180Q86V85 440 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 LIX1Q8N485 282 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 RNF31Q96EP0 1072 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 FAIM2Q9BWQ8 316 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 RABEP2Q9H5N1 569 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 WDR41Q9HAD4 459 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 DLGAP4Q9Y2H0 992 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 MAU2Q9Y6X3 613 aa15.6■□□□□ 0.09
TSPAN4-208ENST00000409531 BLACEA4D250 179 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 PSMD12O00232 456 aaPredicted RBP15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 NDUFAB1O14561 156 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 CHST10O43529 356 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 TMPRSS11DO60235 418 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 ONECUT2O95948 504 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 SDC1P18827 310 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 OR1D4P47884 311 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 LIM2P55344 173 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 RAB38P57729 211 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 STX1BP61266 288 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 RHDQ02161 417 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 SF3A3Q12874 501 aaKnown RBP eCLIP15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 HEPACAMQ14CZ8 416 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 RPS6KA2Q15349 733 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 ZNF385CQ66K41 422 aaPredicted RBP15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 CA13Q8N1Q1 262 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 TMEM132CQ8N3T6 1108 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 METTL27Q8N6F8 245 aaPredicted RBP15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 EFCAB3Q8N7B9 438 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 AMER3Q8N944 861 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 BCAS4Q8TDM0 211 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 C16orf78Q8WTQ4 265 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 SLC45A3Q96JT2 553 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 MYNNQ9NPC7 610 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 MKKSQ9NPJ1 570 aaPredicted RBP15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 AIG1Q9NVV5 245 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 MRPS33Q9Y291 106 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 ARL2BPQ9Y2Y0 163 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 MGAQ8IWI9 3026 aa15.59■□□□□ 0.09
TSPAN4-208ENST00000409531 NUP210LQ5VU65 1888 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 C9J4A7 227 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 ALBP02768 609 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 CD63P08962 238 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 ALDOCP09972 364 aaKnown RBP15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 G6PDP11413 515 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 NCF2P19878 526 aaPredicted RBP15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 TCN2P20062 427 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 CPN2P22792 545 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 DIO3P55073 304 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 TAS2R50P59544 299 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 RUNX2Q13950 521 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 DTWD1Q8N5C7 304 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 OR5T3Q8NGG3 340 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 OR51Q1Q8NH59 317 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 STARD8Q92502 1023 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 MR1Q95460 341 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 FKBP10Q96AY3 582 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 OR1F2PQ96R84 312 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 MAPKAP1Q9BPZ7 522 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 YIPF2Q9BWQ6 316 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 BRINP2Q9C0B6 783 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 PRDM9Q9NQV7 894 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 KCMF1Q9P0J7 381 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 HCN3Q9P1Z3 774 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 IFT80Q9P2H3 777 aaPredicted RBP15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 TRPC4Q9UBN4 977 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 ZNF282Q9UDV7 671 aaPredicted RBP15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 GPN3Q9UHW5 284 aaPredicted RBP15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 FBXW2Q9UKT8 454 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms