RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 OR2I1PQ8NGU4 316 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 FAM110BQ8TC76 370 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 DUS3LQ96G46 650 aaKnown RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 TCTN2Q96GX1 697 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 REXO5Q96IC2 774 aaKnown RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 SERINC2Q96SA4 455 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 SLC35A5Q9BS91 424 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ZMYND15Q9H091 742 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 GAREM1Q9H706 876 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CXorf36Q9H7Y0 433 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 TAS2R9Q9NYW1 312 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 EHD3Q9NZN3 535 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 EPHA6Q9UF33 1036 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 KLHL3Q9UH77 587 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 UTS2RQ9UKP6 389 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 PCDHGB4Q9UN71 923 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 GMEB1Q9Y692 573 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 BDP1A6H8Y1 2624 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 LY6G6EA0A0G2JKS1 128 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ZNF860A6NHJ4 632 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 PGRMC2O15173 223 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 DUX1O43812 170 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 GUCY1B2O75343 617 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 AVPR2P30518 371 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 GABRA4P48169 554 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 OLR1P78380 273 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 RUNX2Q13950 521 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CYP51A1Q16850 503 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 AMZ1Q400G9 498 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 AASDHQ4L235 1098 aaPredicted RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ZC3H12BQ5HYM0 836 aaKnown RBP13.31□□□□□ -0.28
GPNMB-203ENST00000409458 MANEAQ5SRI9 462 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 SERPINA11Q86U17 422 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 PDSS2Q86YH6 399 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ARHGEF39Q8N4T4 335 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 NATD1Q8N6N6 113 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 OR4C6Q8NH72 309 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 OR5AK3PQ8NH89 298 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 OR5P2Q8WZ92 322 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 FIG4Q92562 907 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CCDC74AQ96AQ1 378 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ZDHHC12Q96GR4 267 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CSF3RQ99062 836 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CD180Q99467 661 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 DUSP23Q9BVJ7 150 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 CHST8Q9H2A9 424 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 SOHLH2Q9NX45 425 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 TAS2R7Q9NYW3 318 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 TMEM9Q9P0T7 183 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 PADI4Q9UM07 663 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 U3KQA8 63 aa13.31□□□□□ -0.28
GPNMB-203ENST00000409458 ARID1BQ8NFD5 2236 aaPredicted RBP13.3□□□□□ -0.28
GPNMB-203ENST00000409458 DMDP11532 3685 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 DHRS12A0PJE2 317 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 YKT6O15498 198 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 B4GAT1O43505 415 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 B3GALT2O43825 422 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 NTRK1P04629 796 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 NR2F6P10588 404 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 ALPPL2P10696 532 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 SLC7A1P30825 629 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 GPR3P46089 330 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 CDK9P50750 372 aaKnown RBP13.3□□□□□ -0.28
GPNMB-203ENST00000409458 CCT8P50990 548 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 MVDP53602 400 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 LIM2P55344 173 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 POLE2P56282 527 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 TNFRSF17Q02223 184 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 HSPB3Q12988 150 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 PRTGQ2VWP7 1150 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 TRIM61Q5EBN2 209 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
GPNMB-203ENST00000409458 SLC48A1Q6P1K1 146 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 ZZZ3Q8IYH5 903 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 ADGRG5Q8IZF4 528 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 SHISA5Q8N114 240 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 TRIML2Q8N7C3 387 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 TNIP2Q8NFZ5 429 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 CEP76Q8TAP6 659 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 CANT1Q8WVQ1 401 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 NSMCE2Q96MF7 247 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 DPH2Q9BQC3 489 aaPredicted RBP13.3□□□□□ -0.28
GPNMB-203ENST00000409458 TACO1Q9BSH4 297 aaKnown RBP13.3□□□□□ -0.28
GPNMB-203ENST00000409458 NLNQ9BYT8 704 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 EPB41L1Q9H4G0 881 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 SLC35C2Q9NQQ7 365 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 SIRT3Q9NTG7 399 aaPredicted RBP13.3□□□□□ -0.28
GPNMB-203ENST00000409458 GPATCH2Q9NW75 528 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 KCMF1Q9P0J7 381 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 CES1P1Q9UKY3 287 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 MYO15AQ9UKN7 3530 aa13.3□□□□□ -0.28
GPNMB-203ENST00000409458 NCOR1O75376 2440 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 VPS13AQ96RL7 3174 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 RNF103-CHMP3A0A140T963 221 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 A0A1W2PS29 197 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 CXCR6O00574 342 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 GSTA4O15217 222 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 SIGLEC6O43699 453 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 ERAL1O75616 437 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms