RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 NOP53Q9NZM5 478 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-204ENST00000409323 ADAM29Q9UKF5 820 aa13.3□□□□□ -0.28
CHRNA1-204ENST00000409323 CROTQ9UKG9 612 aa13.3□□□□□ -0.28
CHRNA1-204ENST00000409323 PADI1Q9ULC6 663 aa13.3□□□□□ -0.28
CHRNA1-204ENST00000409323 EIF3LQ9Y262 564 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-204ENST00000409323 PCDHGA7Q9Y5G6 932 aa13.3□□□□□ -0.28
CHRNA1-204ENST00000409323 LOC101059948A0A1B0GTJ6 334 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 PSMD12O00232 456 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 CYR61O00622 381 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 PROM1O43490 865 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 LDB3O75112 727 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 RNH1P13489 461 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 EFNA1P20827 205 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 PTGER1P34995 402 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 RAB38P57729 211 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 UFM1P61960 85 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 TNFRSF17Q02223 184 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 C2orf80Q0P641 193 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 ZSCAN26Q16670 478 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 ZNF750Q32MQ0 723 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 GKAP1Q5VSY0 366 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 GALNT18Q6P9A2 607 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 TMEM132CQ8N3T6 1108 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 IL22RA1Q8N6P7 574 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 AMER2Q8N7J2 671 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 ENDOVQ8N8Q3 282 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 ANKS4BQ8N8V4 417 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 OR9I1Q8NGQ6 314 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 STT3BQ8TCJ2 826 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 DOK4Q8TEW6 326 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 LRFN5Q96NI6 719 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 AIG1Q9NVV5 245 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 ZNF282Q9UDV7 671 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 GPN3Q9UHW5 284 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 EXO1Q9UQ84 846 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 CELSR3Q9NYQ7 3312 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 NUP210LQ5VU65 1888 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 ASPMQ8IZT6 3477 aa13.29□□□□□ -0.28
CHRNA1-204ENST00000409323 C9J4A7 227 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 BMP10O95393 424 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 FHP07954 510 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 ZGLP1P0C6A0 271 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 C8orf89P0DMQ9 161 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 NR2F6P10588 404 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 MAOAP21397 527 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 DLSTP36957 453 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 TSFMP43897 325 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 SKP1P63208 163 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 OCA2Q04671 838 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 KLC1Q07866 573 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 NKG7Q16617 165 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 TBC1D25Q3MII6 688 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 OGFOD2Q6N063 350 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 OVCH1Q7RTY7 1134 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 ESX1Q8N693 406 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 TSLPQ969D9 159 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 NKD1Q969G9 470 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 EXOSC8Q96B26 276 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 TBC1D20Q96BZ9 403 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 MIEF2Q96C03 454 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 CCDC28BQ9BUN5 200 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 ACTL8Q9H568 366 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 LYRM4Q9HD34 91 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 LYARQ9NX58 379 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 MKL2Q9ULH7 1088 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 TMED5Q9Y3A6 229 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 FREM2Q5SZK8 3169 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 TGFBR3LH3BV60 316 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 TLX3O43711 291 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 MAPK1P28482 360 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 STAT5AP42229 794 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 ARFIP1P53367 373 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 DMTNQ08495 405 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 MAD2L1Q13257 205 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 UBAP2LQ14157 1087 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 NCF4Q15080 339 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 RPS6KA2Q15349 733 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 ZNF385BQ569K4 471 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 FAM71E1Q6IPT2 247 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 PAOXQ6QHF9 649 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 ZNF517Q6ZMY9 492 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 SPATA19Q7Z5L4 167 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 OR7A2PQ8NGA2 310 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 SIKE1Q9BRV8 207 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 NPLQ9BXD5 320 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 RPF2Q9H7B2 306 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 MYNNQ9NPC7 610 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 MKKSQ9NPJ1 570 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 LANCL2Q9NS86 450 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 SIRT5Q9NXA8 310 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 IL17BQ9UHF5 180 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 PHF11Q9UIL8 331 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 PTRH2Q9Y3E5 179 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 GPR45Q9Y5Y3 372 aa13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 COPG1Q9Y678 874 aaKnown RBP13.28□□□□□ -0.28
CHRNA1-204ENST00000409323 NCOR2Q9Y618 2525 aa13.27□□□□□ -0.28
CHRNA1-204ENST00000409323 FGF17O60258 216 aa13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 ERAL1O75616 437 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-204ENST00000409323 IL12AP29459 219 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms