RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ARL1P40616 181 aaPredicted RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 CA7P43166 264 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 SMSP52788 366 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 PLIN5Q00G26 463 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 DDX39BQ13838 428 aaKnown RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 PCBP2Q15366 365 aaKnown RBP eCLIP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 MAPKAPK3Q16644 382 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 PFKFB4Q16877 469 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 C1QL3Q5VWW1 255 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 HSDL2Q6YN16 418 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 GALNTL5Q7Z4T8 443 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 VN1R5Q7Z5H4 357 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 LCA5Q86VQ0 697 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 FJX1Q86VR8 437 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 CENPLQ8N0S6 344 aaPredicted RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 CYP4Z2PQ8N1L4 340 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 GHDCQ8N2G8 530 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 CEP112Q8N8E3 955 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ACOT4Q8N9L9 421 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 APCDD1LQ8NCL9 501 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 NFAM1Q8NET5 270 aaPredicted RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 OR5L2Q8NGL0 311 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 OR8K3Q8NH51 312 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 SLC44A1Q8WWI5 657 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 IFT81Q8WYA0 676 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 NCLNQ969V3 563 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ATP6V1E2Q96A05 226 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 MRRFQ96E11 262 aaKnown RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 FRMD6Q96NE9 622 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 SIGLEC12Q96PQ1 595 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 F2RL3Q96RI0 385 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 CDC42EP4Q9H3Q1 356 aaKnown RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 LYARQ9NX58 379 aaKnown RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ANKRD10Q9NXR5 420 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 PSD3Q9NYI0 1048 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 CPSF2Q9P2I0 782 aaKnown RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 VTI1BQ9UEU0 232 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ZNF180Q9UJW8 692 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ZNF490Q9ULM2 529 aaPredicted RBP8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ERVK-11Q9UQG0 969 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 ZGRF1Q86YA3 2104 aa8.48□□□□□ -1.05
SNORD88A-201ENST00000408314 A8MVJ9 347 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 STX16-NPEPL1H3BU86 382 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ACOT7O00154 380 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 CYR61O00622 381 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 STX16O14662 325 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 TFECO14948 347 aaPredicted RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 KLK8O60259 260 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 SLC19A2O60779 497 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 DNAJB6O75190 326 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ITGA10O75578 1167 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 SEMA3DO95025 777 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 CLDN9O95484 217 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ALDOAP04075 364 aaKnown RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ESRRAP11474 423 aaPredicted RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 MTHFD2P13995 350 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ABOP16442 354 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 EPORP19235 508 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 KCNK10P57789 538 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 PMP22Q01453 160 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 TBL3Q12788 808 aaKnown RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 DLG1Q12959 904 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 CUL3Q13618 768 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 GTF2H2Q13888 395 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 TRADDQ15628 312 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 FBXO48Q5FWF7 155 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 TECRLQ5HYJ1 363 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 DEPDC1Q5TB30 811 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 C6orf163Q5TEZ5 329 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 SPINK14Q6IE38 97 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 OR4C11Q6IEV9 310 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 GTF2H2CQ6P1K8 395 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 CLNKQ7Z7G1 428 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 NUDT13Q86X67 352 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 IFT20Q8IY31 132 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ZCCHC7Q8N3Z6 543 aaKnown RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 KIF2BQ8N4N8 673 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ZNF808Q8N4W9 903 aaPredicted RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 HUS1BQ8NHY5 278 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ASB15Q8WXK1 588 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 TANKQ92844 425 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ISL2Q96A47 359 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 TRIM44Q96DX7 344 aaPredicted RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 MTBPQ96DY7 904 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 SCYL1Q96KG9 808 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 DGAT2Q96PD7 388 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 PAFAH2Q99487 392 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 SERPINI1Q99574 410 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 NPAS2Q99743 824 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 ALOXE3Q9BYJ1 711 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 AICDAQ9GZX7 198 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 MRPL46Q9H2W6 279 aaKnown RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 IPPKQ9H8X2 491 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 DMRT3Q9NQL9 472 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 PRDM7Q9NQW5 492 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 HPF1Q9NWY4 346 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 AHSPQ9NZD4 102 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 PPT2Q9UMR5 302 aa8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 DIDO1Q9BTC0 2240 aaKnown RBP8.47□□□□□ -1.05
SNORD88A-201ENST00000408314 EXOC1LA0A1B0GW35 172 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms