RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 C7orf34Q96L11 122 aa23.43■■□□□ 1.34
DNMT3A-206ENST00000406659 GAS2L1Q99501 681 aaPredicted RBP23.43■■□□□ 1.34
DNMT3A-206ENST00000406659 C3orf18Q9UK00 162 aa23.43■■□□□ 1.34
DNMT3A-206ENST00000406659 ANGPT4Q9Y264 503 aa23.43■■□□□ 1.34
DNMT3A-206ENST00000406659 A0A087WXM4 84 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 C10orf142B7Z368 130 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 SH3BP5O60239 455 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 IFNA14P01570 189 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 FPR1P21462 350 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 HIST1H1TP22492 207 aaPredicted RBP23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 ATP5A1P25705 553 aaKnown RBP23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 RAD23AP54725 363 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 STXBP1P61764 594 aaKnown RBP23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 TDGQ13569 410 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 OR8K5Q8NH50 307 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 TSC22D3Q99576 134 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 GABARAPL1Q9H0R8 117 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 PRDM7Q9NQW5 492 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 EHD3Q9NZN3 535 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 DMTF1Q9Y222 760 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 TMEM265A0A087WTH1 108 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 AXIN1O15169 862 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 CDH15P55291 814 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 ITGA1P56199 1179 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 RPS15AP62244 130 aaKnown RBP23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 TGM3Q08188 693 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 SKIV2LQ15477 1246 aaKnown RBP23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 DCP2Q8IU60 420 aaKnown RBP23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 ACOT4Q8N9L9 421 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 SPPL2AQ8TCT8 520 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 UCN3Q969E3 161 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 GPR174Q9BXC1 333 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 RUBCNLQ9H714 662 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 REEP1Q9H902 201 aa23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 TUBA8Q9NY65 449 aaPredicted RBP23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 SAMHD1Q9Y3Z3 626 aaKnown RBP23.42■■□□□ 1.34
DNMT3A-206ENST00000406659 C4orf51C9J302 202 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 M0QX08 132 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 OPN1SWP03999 348 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 TPD52P55327 224 aaPredicted RBP23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 KCNAB2Q13303 367 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 CCDC85BQ15834 202 aaPredicted RBP23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 CNPY1Q3B7I2 92 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 CEACAM20Q6UY09 585 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 CEP68Q76N32 757 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 SYT13Q7L8C5 426 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 C8orf59Q8N0T1 100 aaPredicted RBP23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 SLC22A18ASQ8N1D0 253 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 NRBF2Q96F24 287 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 ING2Q9H160 280 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 SLC35C2Q9NQQ7 365 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 APOBEC3BQ9UH17 382 aaKnown RBP23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 PADI2Q9Y2J8 665 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 SNX11Q9Y5W9 270 aa23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 SNRNP200O75643 2136 aaKnown RBP23.41■■□□□ 1.34
DNMT3A-206ENST00000406659 TMEM229AB2RXF0 380 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 OR6B1O95007 311 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 VIPP01282 170 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 CHRNB1P11230 501 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 CDK9P50750 372 aaKnown RBP23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 MLC1Q15049 377 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 IFI44LQ53G44 452 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 CRB2Q5IJ48 1285 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 COL13A1Q5TAT6 717 aaPredicted RBP23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 C6orf120Q7Z4R8 191 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 THAP5Q7Z6K1 395 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 GPBAR1Q8TDU6 330 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 TAMM41Q96BW9 452 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 DGCR14Q96DF8 476 aaKnown RBP23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 BBS4Q96RK4 519 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 GSDMCQ9BYG8 508 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 AMBRA1Q9C0C7 1298 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 PRO3102Q9H379 93 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 SIRT3Q9NTG7 399 aaPredicted RBP23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 TMEFF2Q9UIK5 374 aaPredicted RBP23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 ASB4Q9Y574 426 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 DPM1O60762 260 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 BMP10O95393 424 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 IGFBP5P24593 272 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 NTSP30990 170 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 RAB8AP61006 207 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 RGS1Q08116 209 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 GPR18Q14330 331 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 MRM1Q6IN84 353 aaKnown RBP23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 RBM44Q6ZP01 1051 aaKnown RBP23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 TRIM73Q86UV7 250 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 ZFPM2Q8WW38 1151 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 OR2A14Q96R47 310 aa23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 WSB2Q9NYS7 404 aaPredicted RBP23.4■■□□□ 1.34
DNMT3A-206ENST00000406659 OR6C74A6NCV1 312 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 C5orf58C9J3I9 102 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 POLR2CP19387 275 aaPredicted RBP23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 GPC1P35052 558 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 TSFMP43897 325 aaKnown RBP23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 CCT3P49368 545 aaKnown RBP23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 LAPTM4AQ15012 233 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 IQCCQ4KMZ1 466 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 ZC3H12BQ5HYM0 836 aaKnown RBP23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 REEP3Q6NUK4 255 aa23.39■■□□□ 1.33
DNMT3A-206ENST00000406659 TNFAIP8L2Q6P589 184 aaPredicted RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms