RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MED8Q96G25 268 aa18.95■□□□□ 0.62
CCDC47-202ENST00000403162 ITM2CQ9NQX7 267 aa18.95■□□□□ 0.62
CCDC47-202ENST00000403162 C1GALT1Q9NS00 363 aa18.95■□□□□ 0.62
CCDC47-202ENST00000403162 CFAP97Q9P2B7 532 aa18.95■□□□□ 0.62
CCDC47-202ENST00000403162 TRIOBPQ9H2D6 2365 aa18.95■□□□□ 0.62
CCDC47-202ENST00000403162 PDZK1P1A8MUH7 402 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 J3KTA2 159 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 PCDH17O14917 1159 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 CCNB2O95067 398 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 PAPLNO95428 1278 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 IFNA14P01570 189 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 ZNF8P17098 575 aaPredicted RBP18.94■□□□□ 0.62
CCDC47-202ENST00000403162 IGFBP4P22692 258 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 CHMP24386 653 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 DMC1Q14565 340 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCDC47-202ENST00000403162 SETD6Q8TBK2 473 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 FAM83CQ9BQN1 747 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 TP63Q9H3D4 680 aaPredicted RBP18.94■□□□□ 0.62
CCDC47-202ENST00000403162 CLN6Q9NWW5 311 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 HS3ST2Q9Y278 367 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 MTCH2Q9Y6C9 303 aa18.94■□□□□ 0.62
CCDC47-202ENST00000403162 SOX1O00570 391 aaPredicted RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 SH3BGRLO75368 114 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 CD72P21854 359 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 TCEA1P23193 301 aaKnown RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 PRIM2P49643 509 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 PNLIPRP1P54315 467 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ZNF763Q0D2J5 394 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ADAM15Q13444 863 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 SSX1Q16384 188 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ZNF630Q2M218 657 aaPredicted RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 RSBN1Q5VWQ0 802 aaPredicted RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ZNF544Q6NX49 715 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 SYCE2Q6PIF2 218 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 SPATC1Q76KD6 591 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 OR4K1Q8NGD4 311 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 OR56A3Q8NH54 315 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 TMCO6Q96DC7 493 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 CEP19Q96LK0 163 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ZDHHC6Q9H6R6 413 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ENPP4Q9Y6X5 453 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 H3BQ06 376 aaPredicted RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 CTDSP2O14595 271 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 BNIP3LO60238 219 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 GADD45GO95257 159 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 C6orf47O95873 294 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 CASP9P55211 416 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 COPZ1P61923 177 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 RPS13P62277 151 aaKnown RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 CDK6Q00534 326 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 TRIM40Q6P9F5 258 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 HTR3DQ70Z44 454 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 RNF130Q86XS8 419 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 Q8N9G6 341 aaPredicted RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ST13P5Q8NFI4 369 aaPredicted RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 GTPBP3Q969Y2 492 aaKnown RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ZSWIM3Q96MP5 696 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 OR2B2Q9GZK3 357 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 ROGDIQ9GZN7 287 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 TPK1Q9H3S4 243 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 TBC1D24Q9ULP9 559 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 GRIP1Q9Y3R0 1128 aa18.93■□□□□ 0.62
CCDC47-202ENST00000403162 PRRC2BQ5JSZ5 2229 aaKnown RBP18.93■□□□□ 0.62
CCDC47-202ENST00000403162 LEFTY2O00292 366 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 GPX5O75715 221 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 SLITRK5O94991 958 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 KRT8P05787 483 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 CRISP1P54107 249 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 PCBP3P57721 371 aaKnown RBP18.92■□□□□ 0.62
CCDC47-202ENST00000403162 PDE7AQ13946 482 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 KLHL17Q6TDP4 642 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 PTCHD4Q6ZW05 846 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 KRT73Q86Y46 540 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 UBQLNLQ8IYU4 475 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 GALNT6Q8NCL4 622 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 OR6F1Q8NGZ6 308 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 WDR36Q8NI36 951 aaKnown RBP18.92■□□□□ 0.62
CCDC47-202ENST00000403162 LMLNQ96KR4 655 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 KCNS3Q9BQ31 491 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 SMURF1Q9HCE7 757 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 DYRK4Q9NR20 520 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 CCL26Q9Y258 94 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 WBP11Q9Y2W2 641 aaKnown RBP18.92■□□□□ 0.62
CCDC47-202ENST00000403162 PLXNA2O75051 1894 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 PRAMEF33A0A0G2JMD5 474 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 A0A1W2PQ67 120 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 TMEM202A6NGA9 273 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 SSX4O60224 188 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 PRAMEF10O60809 474 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 GPR37L1O60883 481 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 POP4O95707 220 aaKnown RBP18.92■□□□□ 0.62
CCDC47-202ENST00000403162 CATP04040 527 aaKnown RBP18.92■□□□□ 0.62
CCDC47-202ENST00000403162 POU2F1P14859 743 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 RHCEP18577 417 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 IMPA1P29218 277 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 TNFSF8P32971 234 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 HTR3AP46098 478 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 OR2B6P58173 313 aa18.92■□□□□ 0.62
CCDC47-202ENST00000403162 RHAGQ02094 409 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms