RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PHF21BQ96EK2 531 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 SCYL1Q96KG9 808 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 TAAR6Q96RI8 345 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 MAPKAP1Q9BPZ7 522 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 HES7Q9BYE0 225 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 SLC29A3Q9BZD2 475 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PITHD1Q9GZP4 211 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 REXO4Q9GZR2 422 aaKnown RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 OR51B5Q9H339 312 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 COPS7BQ9H9Q2 264 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PRDM7Q9NQW5 492 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 KLHL1Q9NR64 748 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PRTFDC1Q9NRG1 225 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PNO1Q9NRX1 252 aaKnown RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 STMN3Q9NZ72 180 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 COPG2Q9UBF2 871 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 XPR1Q9UBH6 696 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ANGPTL3Q9Y5C1 460 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 CLDN16Q9Y5I7 305 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 GPC6Q9Y625 555 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 IKBKGQ9Y6K9 419 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ITPR2Q14571 2701 aa5.4□□□□□ -1.55
HMGB1P20-201ENST00000402555 TEX15Q9BXT5 2789 aa5.4□□□□□ -1.55
HMGB1P20-201ENST00000402555 ABCA12Q86UK0 2595 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 A0A087WUV0 522 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRAV17A0A0B4J275 112 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRBV11-1A0A0K0K1C0 115 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 EXOC1LA0A1B0GW35 172 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TCRBV16S1A1N1A0A5B0 115 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR5H15A6NDH6 313 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ANKUB1A6NFN9 424 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SAGE2PA6NJ88 616 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 GABRR3A8MPY1 467 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SYCE1LA8MT33 242 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 FOXO6A8MYZ6 492 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 CYR61O00622 381 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 RIPK2O43353 540 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 KLK8O60259 260 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 LDB3O75112 727 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 KRT38O76015 456 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 WISP2O76076 250 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 MYO1DO94832 1006 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ETHE1O95571 254 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TUBB4AP04350 444 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 MYBL2P10244 700 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TSPAN8P19075 237 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 GSTM2P28161 218 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 GCAP28676 217 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 EEF1DP29692 281 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ARL1P40616 181 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 CASP2P42575 452 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SERPINB9P50453 376 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 NEK2P51955 445 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ALDH18A1P54886 795 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 MTTPP55157 894 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 LIM2P55344 173 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 RPS13P62277 151 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLC13A2Q13183 592 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 LAPTM5Q13571 262 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TUBA3CQ13748 450 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 E2F2Q14209 437 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 PCBP2Q15366 365 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 CPSF6Q16630 551 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 KHDRBS2Q5VWX1 349 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SPINK14Q6IE38 97 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 GRHL2Q6ISB3 625 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 H3F3CQ6NXT2 135 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 MED27Q6P2C8 311 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 KLC3Q6P597 504 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TUBA3EQ6PEY2 450 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 FAM180AQ6UWF9 173 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 C16orf47Q6ZP98 133 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TAOK1Q7L7X3 1001 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 CD163Q86VB7 1156 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 RPS19BP1Q86WX3 136 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SCUBE1Q8IWY4 988 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 IFT20Q8IY31 132 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 LAS2Q8IYD9 372 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 DEPDC4Q8N2C3 294 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ACOT4Q8N9L9 421 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 NFAM1Q8NET5 270 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR52B6Q8NGF0 335 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 HUS1BQ8NHY5 278 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ELP5Q8TE02 316 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 THAP3Q8WTV1 239 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 FAR1Q8WVX9 515 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 HAS2Q92819 552 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ISL2Q96A47 359 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 MTFMTQ96DP5 389 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SEC16BQ96JE7 1060 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF354BQ96LW1 612 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 NSUN5Q96P11 429 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SIGLEC12Q96PQ1 595 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 KCNC2Q96PR1 638 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 SERINC2Q96SA4 455 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 MTERF1Q99551 399 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 BARD1Q99728 777 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 NPLQ9BXD5 320 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 RNF32Q9H0A6 362 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TSPYL1Q9H0U9 437 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms