RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 DPEP3Q9H4B8 488 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 ZNF665Q9H7R5 613 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 ZCCHC3Q9NUD5 404 aaKnown RBP2.32□□□□□ -2.04
CD47-203ENST00000398258 ZNF319Q9P2F9 582 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 KCNN3Q9UGI6 736 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 FETUBQ9UGM5 382 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 LNPEPQ9UIQ6 1025 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 SH3GLB1Q9Y371 365 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 MRPS18CQ9Y3D5 142 aaKnown RBP2.32□□□□□ -2.04
CD47-203ENST00000398258 CSNK1G3Q9Y6M4 447 aa2.32□□□□□ -2.04
CD47-203ENST00000398258 IQCMA0A1B0GVH7 501 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 A0A1W2PNU3 283 aaPredicted RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 MEX3AA1L020 520 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 G3V2L1 256 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 CHEK1O14757 476 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ARPC1BO15143 372 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 SIGLEC5O15389 551 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 TNFSF12O43508 249 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 MTRF1O75570 445 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 GAS8O95995 478 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 SFTPBP07988 381 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 GSTA2P09210 222 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 CPA3P15088 417 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 AREGP15514 252 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 SELEP16581 610 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 FERP16591 822 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 UGT1A6P19224 532 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 GIFP27352 417 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ALDH3B1P43353 468 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 TNFRSF4P43489 277 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ZFP36L2P47974 494 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 NOVP48745 357 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 FHITP49789 147 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 LUMP51884 338 aaPredicted RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 CRYBA2P53672 197 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 KRTAP12-2P59991 146 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ERVK11-1P61568 191 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 SNRPD1P62314 119 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 CCZ1BP86790 482 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 CCZ1P86791 482 aaPredicted RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 IL1RL1Q01638 556 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 CCDC92Q53HC0 331 aaPredicted RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 TEX35Q5T0J7 233 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 WLSQ5T9L3 541 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 C1orf189Q5VU69 101 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 CAPN13Q6MZZ7 669 aaPredicted RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 TMEM64Q6YI46 380 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 TOM1L2Q6ZVM7 507 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ZER1Q7Z7L7 766 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 OR4N5Q8IXE1 308 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ELMOD2Q8IZ81 293 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ELMOD1Q8N336 334 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ZNF614Q8N883 585 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 CNNM3Q8NE01 707 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 TMEM185AQ8NFB2 350 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 OR10G7Q8NGN6 311 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 SMPDL3AQ92484 453 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 MRPL38Q96DV4 380 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 ERGIC2Q96RQ1 377 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 USP28Q96RU2 1077 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 SPAG8Q99932 426 aaPredicted RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 UBAC1Q9BSL1 405 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 PINK1Q9BXM7 581 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 MARCH7Q9H992 704 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 SYTL2Q9HCH5 934 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 S100A14Q9HCY8 104 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 NDE1Q9NXR1 346 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 TMOD3Q9NYL9 352 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 PLEK2Q9NYT0 353 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 TECRQ9NZ01 308 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 CACNG5Q9UF02 275 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 ASIC3Q9UHC3 531 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 DNPEPQ9ULA0 475 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 CCPG1Q9ULG6 757 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 EXOC7Q9UPT5 735 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 PIN4Q9Y237 131 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 MRPS28Q9Y2Q9 187 aaKnown RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 MTF2Q9Y483 593 aaPredicted RBP2.31□□□□□ -2.04
CD47-203ENST00000398258 PTPRUQ92729 1446 aa2.31□□□□□ -2.04
CD47-203ENST00000398258 RNF103-CHMP3A0A140T963 221 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 MACROD2A1Z1Q3 448 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 TCP10L2B9ZVM9 353 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ANHXE9PGG2 379 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 TRAFD1O14545 582 aaPredicted RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 LRP3O75074 770 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ZNF821O75541 412 aaPredicted RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 NXPH2O95156 264 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 CLDN1O95832 211 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 PGK2P07205 417 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 CHRNGP07510 517 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 APRTP07741 180 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ZSCAN5DPP0CG00 497 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ZNF883P0CG24 379 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 B4GALT1P15291 398 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 ZNF18P17022 549 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 GAP43P17677 238 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 STIP1P31948 543 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 MMP12P39900 470 aa2.3□□□□□ -2.04
CD47-203ENST00000398258 NSFP46459 744 aaKnown RBP2.3□□□□□ -2.04
CD47-203ENST00000398258 HNRNPFP52597 415 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms