RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PNPT1Q8TCS8 783 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 RGMAQ96B86 450 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 THAP11Q96EK4 314 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 ZBTB18Q99592 522 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 U3KQA8 63 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 CABIN1Q9Y6J0 2220 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 PCDH15Q96QU1 1955 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 GNG14A0A1W2PPG7 69 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 CPED1A4D0V7 1026 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 SLC9B1P1A6NJY1 282 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 DUX1O43812 170 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 PRSS23O95084 383 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 GBAP04062 536 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 KLK1P06870 262 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 PNLIPP16233 465 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 CLDN8P56748 225 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 HYAL2Q12891 473 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 TMEM35AQ53FP2 167 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 GUSBP11Q6P575 273 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 USP51Q70EK9 711 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 VN1R4Q7Z5H5 301 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 GPR141Q7Z602 305 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 ASPGQ86U10 573 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 KRTCAP2Q8N6L1 136 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 C19orf47Q8N9M1 422 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 GLB1L3Q8NCI6 653 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 OR52E4Q8NGH9 312 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 FAM110BQ8TC76 370 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 EGLN2Q96KS0 407 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 SORBS1Q9BX66 1292 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 AICDAQ9GZX7 198 aa18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 RPF2Q9H7B2 306 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-204ENST00000397760 RTCAO00442 366 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 CLOCKO15516 846 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 TOR1AIP1Q5JTV8 583 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 RNF44Q7L0R7 432 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 UBE3DQ7Z6J8 389 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 IFNEQ86WN2 208 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 RIMKLAQ8IXN7 391 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 DNAJB8Q8NHS0 232 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 ZNF420Q8TAQ5 688 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 NUDT8Q8WV74 236 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 CNDP2Q96KP4 475 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 RDH12Q96NR8 316 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 CGREF1Q99674 301 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 KLHL31Q9H511 634 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 VPS13AQ96RL7 3174 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 HEATR5BQ9P2D3 2071 aa18.36■□□□□ 0.53
PDLIM2-204ENST00000397760 FAM149AA5PLN7 773 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 TLCD2A6NGC4 264 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 EI24O14681 340 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 DEAF1O75398 565 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 CD1CP29017 333 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 BSGP35613 385 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 PLA2G16P53816 162 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 NUP107P57740 925 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 RGS1Q08116 209 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 ADPRMQ3LIE5 342 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 GLYATQ6IB77 296 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 FRMPD2BQ6IN97 320 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 DHRS4L2Q6PKH6 230 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 PAGE2Q7Z2X7 111 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 ZNF786Q8N393 782 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 CDC26Q8NHZ8 85 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 NT5CQ8TCD5 201 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 MS4A6EQ96DS6 147 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 TM4SF19Q96DZ7 209 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 TMEM74Q96NL1 305 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 CD180Q99467 661 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 CHID1Q9BWS9 393 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 ZNF717Q9BY31 904 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 GORASP2Q9H8Y8 452 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 FAM60AQ9NP50 221 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 KLHL3Q9UH77 587 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 ADAMTS9Q9P2N4 1935 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 LOC105369274A0A096LPK9 316 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 LOC102723532A0A0G2JNH3 316 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 H0YGG7 62 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 TPST1O60507 370 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 GMNNO75496 209 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 LRATO95237 230 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 RETP07949 1114 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 RAP2AP10114 183 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 ARF3P61204 181 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 STXBP1P61764 594 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 CFHR1Q03591 330 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 SUZ12Q15022 739 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 CYBRD1Q53TN4 286 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 OR4C11Q6IEV9 310 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 USP53Q70EK8 1073 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 PLXDC1Q8IUK5 500 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 OR4N4Q8N0Y3 316 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 LZICQ8WZA0 190 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 RERGQ96A58 199 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 TCTN2Q96GX1 697 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 QRFPRQ96P65 431 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 SH3GL1Q99961 368 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 SLC6A16Q9GZN6 736 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 CLMPQ9H6B4 373 aa18.35■□□□□ 0.53
PDLIM2-204ENST00000397760 LNP1A1A4G5 178 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms