RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 C2orf27AQ580R0 203 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 ATAD3BQ5T9A4 648 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 OOSP2Q86WS3 158 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 PTOV1Q86YD1 416 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 ZDHHC21Q8IVQ6 265 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 OR4E2Q8NGC2 313 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 TM4SF19Q96DZ7 209 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 CDCA4Q9BXL8 241 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 EVA1BQ9NVM1 165 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 SNX5Q9Y5X3 404 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 GPC6Q9Y625 555 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-206ENST00000397617 ATG2AQ2TAZ0 1938 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 A0A1B0GTL3 188 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 SCAMP3O14828 347 aaKnown RBP5.59□□□□□ -1.52
PTPRD-206ENST00000397617 PNLIPP16233 465 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 ST13P50502 369 aaKnown RBP5.59□□□□□ -1.52
PTPRD-206ENST00000397617 ISL1P61371 349 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 NR1D2Q14995 579 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 RGNQ15493 299 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 C6orf141Q5SZD1 244 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 MMAAQ8IVH4 418 aaKnown RBP5.59□□□□□ -1.52
PTPRD-206ENST00000397617 C7orf61Q8IZ16 206 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 OR13F1Q8NGS4 319 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF717Q9BY31 904 aaPredicted RBP5.59□□□□□ -1.52
PTPRD-206ENST00000397617 TMCC3Q9ULS5 477 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 TESMINQ9Y4I5 508 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 MMACHCQ9Y4U1 282 aa5.59□□□□□ -1.52
PTPRD-206ENST00000397617 OR5F1O95221 314 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 ITPKAP23677 461 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 TDGQ13569 410 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SMAD2Q15796 467 aaKnown RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 THEMIS2Q5TEJ8 643 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 EGFLAMQ63HQ2 1017 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 TMEM26Q6ZUK4 368 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SPATA6LQ8N4H0 392 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 MINDY2Q8NBR6 621 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 OR2L3Q8NG85 312 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 OR10A6Q8NH74 314 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 CLDN23Q96B33 292 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 OR1F2PQ96R84 312 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 APOOQ9BUR5 198 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 C1orf50Q9BV19 199 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 MKLN1Q9UL63 735 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 BAIAP2Q9UQB8 552 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 PIAS3Q9Y6X2 628 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SPTY2D1-AS1A0A0U1RR47 76 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 PGM3O95394 542 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 FABP3P05413 133 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 TACR1P25103 407 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SSR2P43308 183 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 GPR3P46089 330 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SESN3P58005 492 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SLC35A2P78381 396 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 GPLD1P80108 840 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 CAPRIN1Q14444 709 aaKnown RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 TMPRSS11BQ86T26 416 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NACC2Q96BF6 587 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF556Q9HAH1 456 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 KRCC1Q9NPI7 259 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 LMO7DNF2Z398 122 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 HMGN1P05114 100 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NGFRP08138 427 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SMIM10L1P0DMW3 83 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 TMEM154Q6P9G4 183 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 C17orf47Q8NEP4 570 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 PROX1Q92786 737 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SMIM10Q96HG1 83 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 KCNA7Q96RP8 456 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 HOXD1Q9GZZ0 328 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 COQ10BQ9H8M1 238 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 CLEC1BQ9P126 229 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 CDC14AQ9UNH5 594 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF292O60281 2723 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SAGE2PA6NJ88 616 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 A8MUI8 341 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 MYO1GB0I1T2 1018 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 ONECUT2O95948 504 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF8P17098 575 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 ALOX12P18054 663 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 FKBP2P26885 142 aaKnown RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 RACK1P63244 317 aaKnown RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 UBE2IP63279 158 aaKnown RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 IGLV3-21P80748 117 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 LSAMPQ13449 338 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SFT2D3Q587I9 215 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF697Q5TEC3 545 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SAXO2Q658L1 398 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 GTF2IRD2BQ6EKJ0 949 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 SLC48A1Q6P1K1 146 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 TUBA3EQ6PEY2 450 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 GTF2IRD2Q86UP8 949 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 WDR36Q8NI36 951 aaKnown RBP5.58□□□□□ -1.52
PTPRD-206ENST00000397617 DEDD2Q8WXF8 326 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 MYDGFQ969H8 173 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 HEATR5AQ86XA9 2040 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NPIPB13A6NJU9 1138 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 CLDN24A6NM45 220 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 NPIPB4C9JG80 1138 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 EI24O14681 340 aa5.58□□□□□ -1.52
PTPRD-206ENST00000397617 EMC8O43402 210 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms