RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 LPAR4Q99677 370 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 CHID1Q9BWS9 393 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 MYNNQ9NPC7 610 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 SDHAF3Q9NRP4 125 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 SCN5AQ14524 2016 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 A0A0A6YYC8 382 aaPredicted RBP7.89□□□□□ -1.15
PTPRD-204ENST00000397606 I3L1I5 382 aaPredicted RBP7.89□□□□□ -1.15
PTPRD-204ENST00000397606 MTHFD2P13995 350 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 PFN3P60673 137 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 OLR1P78380 273 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 REEP5Q00765 189 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 C6orf89Q6UWU4 347 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 RNF111Q6ZNA4 994 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 KLHDC8BQ8IXV7 354 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 GEMIN6Q8WXD5 167 aaKnown RBP7.89□□□□□ -1.15
PTPRD-204ENST00000397606 RMND5BQ96G75 393 aaPredicted RBP7.89□□□□□ -1.15
PTPRD-204ENST00000397606 Q96MT0 163 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 SPATA9Q9BWV2 254 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 DEFB126Q9BYW3 111 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 SLC23A2Q9UGH3 650 aa7.89□□□□□ -1.15
PTPRD-204ENST00000397606 CDV3Q9UKY7 258 aaKnown RBP7.89□□□□□ -1.15
PTPRD-204ENST00000397606 BLACEA4D250 179 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 EIF4E1BA6NMX2 242 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 A8MUI8 341 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 LMO7DNF2Z398 122 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 FAM20BO75063 409 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ADAM23O75077 832 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ZNF821O75541 412 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 AK1P00568 194 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 XRCC1P18887 633 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 SLC7A1P30825 629 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 LTBRP36941 435 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 TAS2R38P59533 333 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 POU6F2P78424 691 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 B4GALNT1Q00973 533 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 CAPRIN2Q6IMN6 1127 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 WASH2PQ6VEQ5 465 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 FAM83HQ6ZRV2 1179 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 MINDY1Q8N5J2 469 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 OR5L2Q8NGL0 311 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 NFKBIDQ8NI38 313 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 CNDP2Q96KP4 475 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 DACH2Q96NX9 599 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 RBM4BQ9BQ04 359 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 G6PC3Q9BUM1 346 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 RBM4Q9BWF3 364 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 RERGLQ9H628 205 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 WASH6PQ9NQA3 447 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 PDP1Q9P0J1 537 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 POLR1DQ9Y2S0 133 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 MAU2Q9Y6X3 613 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 TAPBPO15533 448 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 RDH16O75452 317 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 SAGP10523 405 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 LAMP1P11279 417 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 E2F1Q01094 437 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ENPP2Q13822 863 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 TMEM154Q6P9G4 183 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 RTL4Q6ZR62 310 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 RNF44Q7L0R7 432 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 PMEPA1Q969W9 287 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 NR1H4Q96RI1 486 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 BATF3Q9NR55 127 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ZNF638Q14966 1978 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 TARM1B6A8C7 271 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 hCG_2039718K7EN88 272 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 PEX1O43933 1283 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 GPR37L1O60883 481 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 CREG1O75629 220 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ATP6V1B1P15313 513 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 CDH12P55289 794 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ZXDAP98168 799 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 CLCA4Q14CN2 919 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 C6orf120Q7Z4R8 191 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 METTL4Q8N3J2 472 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 SVOPLQ8N434 492 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 FBXL6Q8N531 539 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 SCAIQ8N9R8 606 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ZNF548Q8NEK5 533 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 PIGXQ8TBF5 258 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 GAB3Q8WWW8 586 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 JSRP1Q96MG2 331 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 GPATCH1Q9BRR8 931 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 TAPBPLQ9BX59 468 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 OSBPL11Q9BXB4 747 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 HHATLQ9HCP6 504 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 DNAJB9Q9UBS3 223 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 NAALAD2Q9Y3Q0 740 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 A0A1W2PQF6 199 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 FOXD2O60548 495 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 NME1P15531 152 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ENDOUP21128 410 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 SLC5A12Q1EHB4 618 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 ZIK1Q3SY52 487 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.88□□□□□ -1.15
PTPRD-204ENST00000397606 MANEAQ5SRI9 462 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 POMZP3Q6PJE2 187 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 CYHR1Q6ZMK1 362 aa7.88□□□□□ -1.15
PTPRD-204ENST00000397606 OR4N5Q8IXE1 308 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms