RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 T-ENOLP0DO92 83 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 TACR1P25103 407 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 CPA2P48052 419 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 POLR2JP52435 117 aaKnown RBP12.55□□□□□ -0.4
SEC13-209ENST00000397117 ARFIP1P53367 373 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 CLNS1AP54105 237 aaKnown RBP12.55□□□□□ -0.4
SEC13-209ENST00000397117 CLDN8P56748 225 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 HSD11B2P80365 405 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 ZNF763Q0D2J5 394 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 ADPRMQ3LIE5 342 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 MMEL1Q495T6 779 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 OR4C11Q6IEV9 310 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 TMEM71Q6P5X7 295 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 BLOC1S3Q6QNY0 202 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 OR4N4Q8N0Y3 316 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 CSNK1A1LQ8N752 337 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 BMPERQ8N8U9 685 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 PROKR1Q8TCW9 393 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 TM4SF19Q96DZ7 209 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 SORBS1Q9BX66 1292 aaKnown RBP12.55□□□□□ -0.4
SEC13-209ENST00000397117 SLC6A16Q9GZN6 736 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 CHRNA10Q9GZZ6 450 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 SYNPO2LQ9H987 977 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.55□□□□□ -0.4
SEC13-209ENST00000397117 IRAK4Q9NWZ3 460 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 TMEM9Q9P0T7 183 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 MAPRE3Q9UPY8 281 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 MAN2B2Q9Y2E5 1009 aa12.55□□□□□ -0.4
SEC13-209ENST00000397117 ICE1Q9Y2F5 2266 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 A8MU76 341 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 C9JVG2 144 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 RTCAO00442 366 aaKnown RBP12.54□□□□□ -0.4
SEC13-209ENST00000397117 TXNDC9O14530 226 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 ANKRD28O15084 1053 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 ANGPT2O15123 496 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 SRPX2O60687 465 aaPredicted RBP12.54□□□□□ -0.4
SEC13-209ENST00000397117 LRATO95237 230 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 PRPS1L1P21108 318 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 CSTF2P33240 577 aaKnown RBP eCLIP12.54□□□□□ -0.46e-12■■■□□ 17.9
SEC13-209ENST00000397117 BSGP35613 385 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 HPCAL1P37235 193 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 TSFMP43897 325 aaKnown RBP12.54□□□□□ -0.4
SEC13-209ENST00000397117 SEPHS1P49903 392 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 CORO7P57737 925 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 HYAL2Q12891 473 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 DEFB110Q30KQ9 67 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 TMTC4Q5T4D3 741 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 ABHD17CQ6PCB6 329 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 ABHD13Q7L211 337 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 PRSS42Q7Z5A4 293 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 KMT5CQ86Y97 462 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 FUNDC1Q8IVP5 155 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 DNAJC22Q8N4W6 341 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 KCT2Q8NC54 265 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 STARD8Q92502 1023 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 GAL3ST3Q96A11 431 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 TEX37Q96LM6 180 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 TBCDQ9BTW9 1192 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 COPS7BQ9H9Q2 264 aaPredicted RBP12.54□□□□□ -0.4
SEC13-209ENST00000397117 PLCL2Q9UPR0 1127 aa12.54□□□□□ -0.4
SEC13-209ENST00000397117 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 A0A088AWK7 358 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 A0A0G2JN53 185 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 DYTNA2CJ06 578 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 CCDC154A6NI56 674 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 EFCAB7A8K855 629 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 BBIP1A8MTZ0 92 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 B2RBV5 119 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 TOX3O15405 576 aaPredicted RBP12.53□□□□□ -0.4
SEC13-209ENST00000397117 P2RX6O15547 441 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 AKAP10O43572 662 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 PRMT3O60678 531 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 CD1EP15812 388 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 ZNF10P21506 573 aaPredicted RBP12.53□□□□□ -0.4
SEC13-209ENST00000397117 MAPK12P53778 367 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 RAB8AP61006 207 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 NCALDP61601 193 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 RCAN2Q14206 197 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 HKDC1Q2TB90 917 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 VPS26BQ4G0F5 336 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 WASHC2DQ5SRD0 308 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 DCAF12Q5T6F0 453 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 UBE3DQ7Z6J8 389 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 TMEM132CQ8N3T6 1108 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 KRTCAP2Q8N6L1 136 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 C9orf43Q8TAL5 461 aaPredicted RBP12.53□□□□□ -0.4
SEC13-209ENST00000397117 ZCCHC10Q8TBK6 192 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 C16orf78Q8WTQ4 265 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 TSPEARQ8WU66 669 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 GFM2Q969S9 779 aaKnown RBP12.53□□□□□ -0.4
SEC13-209ENST00000397117 SPDL1Q96EA4 605 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 EGLN2Q96KS0 407 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 PRPF18Q99633 342 aaKnown RBP12.53□□□□□ -0.4
SEC13-209ENST00000397117 ZNF717Q9BY31 904 aaPredicted RBP12.53□□□□□ -0.4
SEC13-209ENST00000397117 ROGDIQ9GZN7 287 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 ACTL8Q9H568 366 aa12.53□□□□□ -0.4
SEC13-209ENST00000397117 DDX31Q9H8H2 851 aaKnown RBP12.53□□□□□ -0.4
SEC13-209ENST00000397117 EFCAB1Q9HAE3 211 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms