RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 CSTF2P33240 577 aaKnown RBP eCLIP22.93■■□□□ 1.268e-7■■■■■ 29.8
CSNK1E-203ENST00000396832 RGNQ15493 299 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 LRRC70Q7Z2Q7 622 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 FAM129BQ96TA1 746 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 CHST8Q9H2A9 424 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 CLCA3PQ9Y6N3 262 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 TRAV19A0A0A6YYK7 116 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 HMGA1P17096 107 aaKnown RBP22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 POU3F3P20264 500 aaPredicted RBP22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 LHCGRP22888 699 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 PTX3P26022 381 aaPredicted RBP22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 CDKN3Q16667 212 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 LCN1P1Q5VSP4 162 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 MFSD14CQ5VZR4 134 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 LILRA3Q8N6C8 439 aaPredicted RBP22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 SAMD11Q96NU1 681 aa22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 GTPBP2Q9BX10 602 aaKnown RBP22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 NDRG2Q9UN36 371 aaKnown RBP22.93■■□□□ 1.26
CSNK1E-203ENST00000396832 PRPH2P23942 346 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 CRHR2Q13324 411 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 LEXMQ3ZCV2 418 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 DGKKQ5KSL6 1271 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 CPTPQ5TA50 214 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 METTL2BQ6P1Q9 378 aaKnown RBP22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 ARL14EPQ8N8R7 260 aaPredicted RBP22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 NFKBIDQ8NI38 313 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 CCDC120Q96HB5 630 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 POLR2J2Q9GZM3 115 aaKnown RBP22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 TRIM45Q9H8W5 580 aaPredicted RBP22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 C11orf16Q9NQ32 467 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 PLEKHB1Q9UF11 243 aaPredicted RBP22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 MAP4K5Q9Y4K4 846 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 SEPT4O43236 478 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 MPZL2O60487 215 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 SCO1O75880 301 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 ANXA4P09525 319 aaPredicted RBP22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 SRCP12931 536 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 MAP2K3P46734 347 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 PFN3P60673 137 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 LIPKQ5VXJ0 399 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 SCAMP4Q969E2 229 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 MSLNLQ96KJ4 702 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 MCOLN1Q9GZU1 580 aa22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 FAM120CQ9NX05 1096 aaKnown RBP22.92■■□□□ 1.26
CSNK1E-203ENST00000396832 INPPL1O15357 1258 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 TSC22D2O75157 780 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 TRIM3O75382 744 aaPredicted RBP22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 IGHA2P01877 340 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 MAPK12P53778 367 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 AP1S1P61966 158 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 IFI44LQ53G44 452 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 IER5LQ5T953 404 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 TXNDC8Q6A555 127 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 SLC51BQ86UW2 128 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 ATP6V1C2Q8NEY4 427 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 CIDECQ96AQ7 238 aaPredicted RBP22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 MAPKAP1Q9BPZ7 522 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 CWH43Q9H720 699 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 FRMPD3Q5JV73 1810 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 A0A0C4DFX4 3053 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 ZAR1LA6NP61 321 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 SOX14O95416 240 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 PCGF2P35227 344 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 MAN2A2P49641 1150 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 MC1RQ01726 317 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 FAM205BPQ63HN1 556 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 KLHL17Q6TDP4 642 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 BCDIN3DQ7Z5W3 292 aaKnown RBP22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 C11orf65Q8NCR3 313 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 OR8J2Q8NGG1 315 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 ZIC5Q96T25 663 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 MCUBQ9NWR8 336 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 NDUFB11Q9NX14 153 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 B3GNT2Q9NY97 397 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 HCN4Q9Y3Q4 1203 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 OR51B4Q9Y5P0 310 aa22.91■■□□□ 1.26
CSNK1E-203ENST00000396832 IGFBP1P08833 259 aaPredicted RBP22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 HBQ1P09105 142 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 PIPP12273 146 aaPredicted RBP22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 SLC6A12P48065 614 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 DOC2AQ14183 400 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 ZNF385BQ569K4 471 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 TJAP1Q5JTD0 557 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 DDI2Q5TDH0 399 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 FAAH2Q6GMR7 532 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 ABI3BPQ7Z7G0 1075 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 ASB11Q8WXH4 323 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 NACC2Q96BF6 587 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 GPATCH2Q9NW75 528 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 PCDHB7Q9Y5E2 793 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 DNMT3AQ9Y6K1 912 aaPredicted RBP22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 SCAMP2O15127 329 aaKnown RBP22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 MSL3P1P0C860 447 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 NAE1Q13564 534 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 FRMPD2BQ6IN97 320 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 NPAS3Q8IXF0 933 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 FBXL6Q8N531 539 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 AQP11Q8NBQ7 271 aa22.9■■□□□ 1.26
CSNK1E-203ENST00000396832 C19orf18Q8NEA5 215 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms