RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ANKRD17O75179 2603 aaKnown RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 TRGV8A0A0C4DH27 118 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 A0A1B0GUH1 482 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 FEZF1A0PJY2 475 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 LRRC14BA6NHZ5 514 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 A8MUI8 341 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 SLCO1B7G3V0H7 640 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 SGK494L7N484 410 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CLGNO14967 610 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 LCMT2O60294 686 aaKnown RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CRCPO75575 148 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 TGDSO95455 350 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CHRNGP07510 517 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 C8orf89P0DMQ9 161 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 GDF5P43026 501 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 RPL14P50914 215 aaKnown RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CCNG1P51959 295 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CDH13P55290 713 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 PKNOX1P55347 436 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 PER3P56645 1201 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 TBPL1P62380 186 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 ZNF33BQ06732 778 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 NAE1Q13564 534 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 FAM53BQ14153 422 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CDSNQ15517 529 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 C18orf21Q32NC0 220 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 THEMIS2Q5TEJ8 643 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 GARNL3Q5VVW2 1013 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CES4AQ5XG92 561 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 GFRALQ6UXV0 394 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 GOLGA7Q7Z5G4 137 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 THOC6Q86W42 341 aaKnown RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 PDSS2Q86YH6 399 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 WDR75Q8IWA0 830 aaKnown RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 MCEMP1Q8IX19 187 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 KLHDC8AQ8IYD2 350 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 SLC34A3Q8N130 599 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 KCT2Q8NC54 265 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 OR56A3Q8NH54 315 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 OR51Q1Q8NH59 317 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 RERGQ96A58 199 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 PYCR2Q96C36 320 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 MOCOSQ96EN8 888 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CCDC120Q96HB5 630 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 FAR2Q96K12 515 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 SIGLEC12Q96PQ1 595 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 CCT8L2Q96SF2 557 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 SORT1Q99523 831 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 SIKE1Q9BRV8 207 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 C20orf27Q9GZN8 174 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 PCBD2Q9H0N5 130 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 NOL11Q9H8H0 719 aaKnown RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-202ENST00000396828 IPPKQ9H8X2 491 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 MID1IP1Q9NPA3 183 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 C14orf105Q9NVL8 296 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 RIC8BQ9NVN3 520 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 ANKRD10Q9NXR5 420 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 STMN3Q9NZ72 180 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 HCN3Q9P1Z3 774 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 SH3BGRL2Q9UJC5 107 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 SLC22A14Q9Y267 594 aa9.72□□□□□ -0.85
NEDD8-202ENST00000396828 OR5H15A6NDH6 313 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 HAX1O00165 279 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 NDUFAB1O14561 156 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 HNRNPRO43390 633 aaKnown RBP9.71□□□□□ -0.86
NEDD8-202ENST00000396828 PRAMEF2O60811 474 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 RASAL1O95294 804 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ESRRBO95718 433 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 CHEK2O96017 543 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 B3GALT4O96024 378 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 KITP10721 976 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 IL1RNP18510 177 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 TSPAN8P19075 237 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 DRD4P21917 467 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 CSNK1G2P78368 415 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 RELAQ04206 551 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 GABPB1Q06547 395 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-202ENST00000396828 MINDY4Q4G0A6 757 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 SH2D4BQ5SQS7 431 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 GKAP1Q5VSY0 366 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-202ENST00000396828 TMEM214Q6NUQ4 689 aaKnown RBP9.71□□□□□ -0.86
NEDD8-202ENST00000396828 RIPOR1Q6ZS17 1223 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 GPRIN3Q6ZVF9 776 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 RPS27LQ71UM5 84 aaKnown RBP9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ANKRD37Q7Z713 158 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 BEST3Q8N1M1 668 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ZNF781Q8N8C0 355 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ZCCHC10Q8TBK6 192 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 AGR3Q8TD06 166 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 BCAS4Q8TDM0 211 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 AGAP11Q8TF27 550 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 TM4SF19Q96DZ7 209 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 NSUN5Q96P11 429 aaKnown RBP9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ZNF382Q96SR6 550 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 HAUS8Q9BT25 410 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 TUBB6Q9BUF5 446 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 RBCK1Q9BYM8 510 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 SHCBP1LQ9BZQ2 653 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms