RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 COQ8BQ96D53 544 aa15.02■□□□□ -0
GNE-202ENST00000396594 SLC17A9Q9BYT1 436 aa15.02■□□□□ -0
GNE-202ENST00000396594 STOX2Q9P2F5 926 aaPredicted RBP15.02■□□□□ -0
GNE-202ENST00000396594 SLC6A5Q9Y345 797 aa15.02■□□□□ -0
GNE-202ENST00000396594 E7ENX8 843 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 PLOD2O00469 737 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 CASC3O15234 703 aaKnown RBP15.02□□□□□ -0.01
GNE-202ENST00000396594 GJB5O95377 273 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 ZNF45Q02386 682 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 SOX4Q06945 474 aaPredicted RBP15.02□□□□□ -0.01
GNE-202ENST00000396594 SPANXN4Q5MJ08 99 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 WDTC1Q8N5D0 677 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 NAT6Q93015 286 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 PDLIM5Q96HC4 596 aaKnown RBP15.02□□□□□ -0.01
GNE-202ENST00000396594 TSSK6Q9BXA6 273 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 ADAM29Q9UKF5 820 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 FOXE1O00358 373 aaPredicted RBP15.02□□□□□ -0.01
GNE-202ENST00000396594 TGM5O43548 720 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 RPL6Q02878 288 aaKnown RBP15.02□□□□□ -0.01
GNE-202ENST00000396594 MZT1Q08AG7 82 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 KCTD19Q17RG1 926 aaPredicted RBP15.02□□□□□ -0.01
GNE-202ENST00000396594 RAB41Q5JT25 222 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 CATSPEREQ5SY80 951 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 TIGD4Q8IY51 512 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 CANT1Q8WVQ1 401 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 PYCR2Q96C36 320 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 WASF2Q9Y6W5 498 aa15.02□□□□□ -0.01
GNE-202ENST00000396594 ISPDA4D126 451 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 SDHDO14521 159 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 PCDHGA12O60330 932 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 UBL4AP11441 157 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 CSF2RAP15509 400 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 YPEL5P62699 121 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 RANBP10Q6VN20 620 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 IQCHQ86VS3 1027 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 DENND6BQ8NEG7 585 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 NUP43Q8NFH3 380 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 S100A16Q96FQ6 103 aaKnown RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 KLF16Q9BXK1 252 aaPredicted RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 JUNP05412 331 aaKnown RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 HTR3AP46098 478 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 C1orf220Q5T0J3 134 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 SLC2A7Q6PXP3 512 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 BADQ92934 168 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 MNTQ99583 582 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 MMP27Q9H306 513 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 TBC1D17Q9HA65 648 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 NCDNQ9UBB6 729 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 SCP2D1Q9UJQ7 156 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 NUP98P52948 1817 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 POLR1CO15160 346 aaPredicted RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 RASAL1O95294 804 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 DCAF7P61962 342 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 TBPL1P62380 186 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 PTGR1Q14914 329 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 TXNDC5Q8NBS9 432 aaKnown RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 ATP6V1C2Q8NEY4 427 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 CCDC106Q9BWC9 280 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 MTHFD2LQ9H903 347 aaPredicted RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 SPATA6Q9NWH7 488 aaPredicted RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 C14orf166Q9Y224 244 aaKnown RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 A0A0D9SEW6 157 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 CENPBD1B2RD01 187 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 S1PR1P21453 382 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 RBMS1P29558 406 aaKnown RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 OCLNQ16625 522 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 UNC50Q53HI1 259 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 LINGO2Q7L985 606 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 TM9SF2Q99805 663 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 ACTR6Q9GZN1 396 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 OAZ3Q9UMX2 235 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 USP54Q70EL1 1684 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 JRKO75564 520 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 PNMTP11086 282 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 IFI30P13284 250 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 HOXB9P17482 250 aaPredicted RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 JUNDP17535 347 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 PAX7P23759 505 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 PIM3Q86V86 326 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 TRUB1Q8WWH5 349 aaKnown RBP15.01□□□□□ -0.01
GNE-202ENST00000396594 EBF2Q9HAK2 575 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 ZFP57Q9NU63 452 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 PCDHB14Q9Y5E9 798 aa15.01□□□□□ -0.01
GNE-202ENST00000396594 FAM149AA5PLN7 773 aa15□□□□□ -0.01
GNE-202ENST00000396594 A6NIZ1 184 aa15□□□□□ -0.01
GNE-202ENST00000396594 DLGAP1O14490 977 aa15□□□□□ -0.01
GNE-202ENST00000396594 BRINP1O60477 761 aa15□□□□□ -0.01
GNE-202ENST00000396594 OR4D2P58180 307 aa15□□□□□ -0.01
GNE-202ENST00000396594 CLRN1P58418 232 aa15□□□□□ -0.01
GNE-202ENST00000396594 RAP1BP61224 184 aa15□□□□□ -0.01
GNE-202ENST00000396594 RAP1AP62834 184 aa15□□□□□ -0.01
GNE-202ENST00000396594 PLCXD2Q0VAA5 305 aa15□□□□□ -0.01
GNE-202ENST00000396594 VEZF1Q14119 521 aa15□□□□□ -0.01
GNE-202ENST00000396594 MSS51Q4VC12 460 aa15□□□□□ -0.01
GNE-202ENST00000396594 IDNKQ5T6J7 187 aa15□□□□□ -0.01
GNE-202ENST00000396594 LCN8Q6JVE9 175 aa15□□□□□ -0.01
GNE-202ENST00000396594 BLOC1S3Q6QNY0 202 aa15□□□□□ -0.01
GNE-202ENST00000396594 MARCH9Q86YJ5 346 aa15□□□□□ -0.01
GNE-202ENST00000396594 OR2L3Q8NG85 312 aa15□□□□□ -0.01
GNE-202ENST00000396594 MR1Q95460 341 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms