RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IL27RAQ6UWB1 636 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ENPP6Q6UWR7 440 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 LDB1Q86U70 411 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 TP53INP2Q8IXH6 220 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CDH26Q8IXH8 852 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZZZ3Q8IYH5 903 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZFP41Q8N8Y5 198 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 SERPINB11Q96P15 392 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZNF670Q9BS34 389 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 C16orf70Q9BSU1 422 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZNF350Q9GZX5 532 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 MIOSQ9NXC5 875 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 FBXL12Q9NXK8 326 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 DTLQ9NZJ0 730 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 MGAT4CQ9UBM8 478 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 EMCNQ9ULC0 261 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 TIMM13Q9Y5L4 95 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 USP3Q9Y6I4 520 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 NUMA1Q14980 2115 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 H3BQ06 376 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 UBXN8O00124 270 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 RNGTTO60942 597 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 SIX3O95343 332 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 NQO2P16083 231 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 SOX3P41225 446 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 AKR1C3P42330 323 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 PSMA6P60900 246 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 PSPHP78330 225 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 SLC6A3Q01959 620 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 MVKQ03426 396 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 TWF1Q12792 350 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 OPCMLQ14982 345 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CHRNA6Q15825 494 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 DPYSL2Q16555 572 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 NTRK2Q16620 822 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 VMACQ2NL98 169 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 BEX5Q5H9J7 111 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 Q5PR19 223 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 NCBP2-AS2Q69YL0 99 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 TAPT1Q6NXT6 567 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 Q6ZPB1 254 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 CYP4Z1Q86W10 505 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 GPSM1Q86YR5 675 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 GPALPP1Q8IXQ4 340 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZNF248Q8NDW4 579 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 OR1M1Q8NGA1 313 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 OR10H5Q8NGA6 315 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 NDRG1Q92597 394 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 C7orf34Q96L11 122 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZNF578Q96N58 590 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 KCTD15Q96SI1 283 aaPredicted RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 S100A13Q99584 98 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 OSMRQ99650 979 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 ZCCHC2Q9C0B9 1178 aaKnown RBP8.1□□□□□ -1.11
NDE1-202ENST00000396355 TMEM185BQ9H7F4 350 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 C11orf16Q9NQ32 467 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 COMMD9Q9P000 198 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 VWA7Q9Y334 891 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 CACNG2Q9Y698 323 aa8.1□□□□□ -1.11
NDE1-202ENST00000396355 UBFD1O14562 309 aaKnown RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 AZIN1O14977 448 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 PRICKLE3O43900 615 aaPredicted RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 TGM6O95932 706 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 PAICSP22234 425 aaKnown RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 HOXA11P31270 313 aaPredicted RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 THPOP40225 353 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 POLR2JP52435 117 aaKnown RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 GK2Q14410 553 aaPredicted RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 FAM219BQ5XKK7 198 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 XAF1Q6GPH4 301 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 C1orf94Q6P1W5 598 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 B3GLCTQ6Y288 498 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 LURAP1LQ8IV03 231 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 SPNS2Q8IVW8 549 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 ZNF615Q8N8J6 731 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 PNPLA1Q8N8W4 532 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 HAVCR2Q8TDQ0 301 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 ST7LQ8TDW4 575 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 CHAC2Q8WUX2 184 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 ROPN1LQ96C74 230 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 SLC29A3Q9BZD2 475 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 NPAP1Q9NZP6 1156 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 STUB1Q9UNE7 303 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 ELOVL7A1L3X0 281 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 TMEM200CA6NKL6 621 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 H7C1Q1 480 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 ADH1CP00326 375 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 PCCBP05166 539 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 ADRB1P08588 477 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 SPARCP09486 303 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 GOT1P17174 413 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 CPN2P22792 545 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 LMO2P25791 158 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 AXLP30530 894 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 GSTM5P46439 218 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 RPS5P46782 204 aaKnown RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 HOXA1P49639 335 aaPredicted RBP8.09□□□□□ -1.11
NDE1-202ENST00000396355 ZNF234Q14588 700 aa8.09□□□□□ -1.11
NDE1-202ENST00000396355 CTU2Q2VPK5 515 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms