RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RSL1D1O76021 490 aaKnown RBP18.06■□□□□ 0.48
HOXA9-202ENST00000396345 LINC00032P0C843 101 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 ACPPP15309 386 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 HNRNPFP52597 415 aaKnown RBP18.06■□□□□ 0.48
HOXA9-202ENST00000396345 HNRNPH2P55795 449 aaKnown RBP18.06■□□□□ 0.48
HOXA9-202ENST00000396345 BTG2P78543 158 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 ACSM2AQ08AH3 577 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 NSDHLQ15738 373 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 TBR1Q16650 682 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 HSP90B2PQ58FF3 399 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 ACSM2BQ68CK6 577 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 KIRREL2Q6UWL6 708 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 DDIASQ8IXT1 998 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 ZNF781Q8N8C0 355 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 TMEM52Q8NDY8 209 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 TSLPQ969D9 159 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 C8orf44Q96CB5 159 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 APIPQ96GX9 242 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 MESP1Q9BRJ9 268 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 PRDM9Q9NQV7 894 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 PRTFDC1Q9NRG1 225 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 THAP1Q9NVV9 213 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 ATG4BQ9Y4P1 393 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 MMACHCQ9Y4U1 282 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 ASB4Q9Y574 426 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 MGAQ8IWI9 3026 aa18.06■□□□□ 0.48
HOXA9-202ENST00000396345 ARGFXA6NJG6 315 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 PIP5K1BO14986 540 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 PROM1O43490 865 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 SNNO75324 88 aaPredicted RBP18.05■□□□□ 0.48
HOXA9-202ENST00000396345 ITGB2P05107 769 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 NR1D1P20393 614 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 MAOAP21397 527 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 TLX1P31314 330 aaPredicted RBP18.05■□□□□ 0.48
HOXA9-202ENST00000396345 BUD31P41223 144 aaPredicted RBP18.05■□□□□ 0.48
HOXA9-202ENST00000396345 RPL14P50914 215 aaKnown RBP18.05■□□□□ 0.48
HOXA9-202ENST00000396345 MAPK12P53778 367 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 HSD17B7P56937 341 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 EEF1A2Q05639 463 aaKnown RBP18.05■□□□□ 0.48
HOXA9-202ENST00000396345 BORAQ6PGQ7 559 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 LANCL3Q6ZV70 420 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 KIRREL3Q8IZU9 778 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 OR11G2Q8NGC1 345 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 DYDC1Q8WWB3 177 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 ZNF75CPQ92670 426 aaPredicted RBP18.05■□□□□ 0.48
HOXA9-202ENST00000396345 MED4Q9NPJ6 270 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 INTS9Q9NV88 658 aaKnown RBP18.05■□□□□ 0.48
HOXA9-202ENST00000396345 C19orf25Q9UFG5 118 aaPredicted RBP18.05■□□□□ 0.48
HOXA9-202ENST00000396345 MCM8Q9UJA3 840 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 HAO1Q9UJM8 370 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 FBXL4Q9UKA2 621 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 CCL27Q9Y4X3 112 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 PCSK5Q92824 1860 aa18.05■□□□□ 0.48
HOXA9-202ENST00000396345 LOC102723996A0A087X1L8 192 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 BLACEA4D250 179 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 DYNC1I1O14576 645 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 RRADP55042 308 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 RAE1P78406 368 aaKnown RBP18.04■□□□□ 0.48
HOXA9-202ENST00000396345 TNFRSF17Q02223 184 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 SLC13A2Q13183 592 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 C18orf63Q68DL7 685 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 Q6ZSR9 355 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 ANKRD37Q7Z713 158 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 SCUBE1Q8IWY4 988 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 TMEM102Q8N9M5 508 aaPredicted RBP18.04■□□□□ 0.48
HOXA9-202ENST00000396345 APOBEC4Q8WW27 367 aaKnown RBP18.04■□□□□ 0.48
HOXA9-202ENST00000396345 EXTL1Q92935 676 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 FER1L6-AS2Q96M78 137 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 NECTIN3Q9NQS3 549 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 SIRT5Q9NXA8 310 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 KCNMB2Q9Y691 235 aa18.04■□□□□ 0.48
HOXA9-202ENST00000396345 GNG14A0A1W2PPG7 69 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 A0A1W2PR48 441 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 KLF11O14901 512 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 PCDH7O60245 1069 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 CTNSO60931 367 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 GUCY1B2O75343 617 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 SEC22BO75396 215 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 SKAP2O75563 359 aaPredicted RBP18.03■□□□□ 0.48
HOXA9-202ENST00000396345 NR2F6P10588 404 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 COX6A1P12074 109 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 PRPH2P23942 346 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 TIA1P31483 386 aaKnown RBP eCLIP18.03■□□□□ 0.48
HOXA9-202ENST00000396345 TRA2BP62995 288 aaKnown RBP18.03■□□□□ 0.48
HOXA9-202ENST00000396345 RHDQ02161 417 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 NR6A1Q15406 480 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 CPZQ66K79 652 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 GALNT18Q6P9A2 607 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 NDUFAF7Q7L592 441 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 CPEB2Q7Z5Q1 589 aaKnown RBP18.03■□□□□ 0.48
HOXA9-202ENST00000396345 CLNKQ7Z7G1 428 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 OR2T11Q8NH01 316 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 TANKQ92844 425 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 C11orf24Q96F05 449 aaPredicted RBP18.03■□□□□ 0.48
HOXA9-202ENST00000396345 METTL2AQ96IZ6 378 aaKnown RBP18.03■□□□□ 0.48
HOXA9-202ENST00000396345 CCT7Q99832 543 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 ZNF700Q9H0M5 742 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 ING2Q9H160 280 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 RPF2Q9H7B2 306 aaKnown RBP18.03■□□□□ 0.48
HOXA9-202ENST00000396345 WDR41Q9HAD4 459 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms