RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PRKCDQ05655 676 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 BBS10Q8TAM1 723 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ELP5Q8TE02 316 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HDAC2Q92769 488 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SLC45A3Q96JT2 553 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ACTR6Q9GZN1 396 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MEAF6Q9HAF1 191 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TXNRD2Q9NNW7 524 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 GPRC5BQ9NZH0 403 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 DISC1C4P0D8 188 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 XPNPEP2O43895 674 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TYROBPO43914 113 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 LEFTY1O75610 366 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 INMTO95050 263 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CDRT1O95170 752 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OPN1SWP03999 348 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 C1GALT1C1LP0DN25 315 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MAGEA2P43356 314 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CDKN1CP49918 316 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ABRAXAS2Q15018 415 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SHQ1Q6PI26 577 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MAMDC4Q6UXC1 1216 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 C3P1Q6ZMU1 363 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TCEANCQ8N8B7 351 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OR2M4Q96R27 311 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TTYH2Q9BSA4 534 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 RANBP3Q9H6Z4 567 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MAGED1Q9Y5V3 778 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 E7EQ34 232 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 NFKBIEO00221 500 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MAN2B1O00754 1011 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 C5AR1P21730 350 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HOXD13P35453 343 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HERV-K104P61576 105 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 UMODL1-AS1Q8N2C9 162 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OR2L2Q8NH16 312 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM74Q96NL1 305 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TSSK6Q9BXA6 273 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ADAMTS10Q9H324 1103 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CCDC86Q9H6F5 360 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ISPDA4D126 451 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SCAMP1O15126 338 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HCRTR2O43614 444 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ARHGEF15O94989 841 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SYNGR4O95473 234 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 GKN3PP0CG01 181 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CD83Q01151 205 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 KIAA0319Q5VV43 1072 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 BAIAP2L2Q6UXY1 529 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 MINDY1Q8N5J2 469 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OR5T2Q8NGG2 359 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OR5L2Q8NGL0 311 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SUN5Q8TC36 379 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF689Q96CS4 500 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 GAL3ST1Q99999 423 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 RMI1Q9H9A7 625 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM98Q9Y2Y6 226 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TJP1Q07157 1748 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SDK1Q7Z5N4 2213 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 DUX1O43812 170 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF623O75123 536 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 SNAI1O95863 264 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 CSTAP01040 98 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 RHOP08100 348 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 TMBIM6P55061 237 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 HSD11B2P80365 405 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 GALNT1Q10472 559 aaPredicted RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 XKRXQ6PP77 449 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ASPGQ86U10 573 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 LAS2Q8IYD9 372 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OR56A3Q8NH54 315 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF675Q8TD23 568 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 OR51B5Q9H339 312 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 B4GALT7Q9UBV7 327 aa5.25□□□□□ -1.57
VPS13C-204ENST00000395898 ZFR2Q9UPR6 939 aaKnown RBP5.25□□□□□ -1.57
VPS13C-204ENST00000395898 C4BP0C0L5 1744 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 H7BY64 318 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 KHNYNO15037 678 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SYPP08247 313 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 EIF2S3P41091 472 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 SOX9P48436 509 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TPTEP56180 551 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GNG2P59768 71 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ST3GAL4Q11206 333 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 TXNDC5Q8NBS9 432 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 NEIL3Q8TAT5 605 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PRAP1Q96NZ9 151 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 XYLT2Q9H1B5 865 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MALT1Q9UDY8 824 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HSPE1-MOB4S4R3N1 261 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 MYO5AQ9Y4I1 1855 aaKnown RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 HPRP00739 348 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 PENKP01210 267 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 CHRM5P08912 532 aaPredicted RBP5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GRIA2P42262 883 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ZNF181Q2M3W8 571 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 ANKDD1AQ495B1 522 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 GLT8D1Q68CQ7 371 aa5.24□□□□□ -1.57
VPS13C-204ENST00000395898 LRRN1Q6UXK5 716 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms