RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 C15orf38-AP3S2A0A0A6YYH1 394 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 FITM1A5D6W6 292 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 D6RAR5 112 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 SGK494L7N484 410 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 SLC6A2P23975 617 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 NBL1P41271 181 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 TRPC1P48995 793 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 TNFRSF17Q02223 184 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 FAM53BQ14153 422 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 MPEG1Q2M385 716 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 LRIF1Q5T3J3 769 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 NANOGP8Q6NSW7 305 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 NIPAL1Q6NVV3 410 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 ARPINQ7Z6K5 226 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 KIAA2013Q8IYS2 634 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 GPR135Q8IZ08 494 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 OR9A4Q8NGU2 314 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 UCN3Q969E3 161 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 CCDC115Q96NT0 180 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 GBP5Q96PP8 586 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 NPLQ9BXD5 320 aaPredicted RBP19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 NANOGQ9H9S0 305 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 LYRM4Q9HD34 91 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 PARD6AQ9NPB6 346 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 MS4A12Q9NXJ0 267 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 TMEM181Q9P2C4 612 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 SERTAD3Q9UJW9 196 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 UTS2RQ9UKP6 389 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 L3MBTL1Q9Y468 752 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 SPACA6W5XKT8 324 aa19.32■□□□□ 0.68
VCPKMT-202ENST00000395860 ASCC3Q8N3C0 2202 aaKnown RBP19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 A0A0A6YYC8 382 aaPredicted RBP19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 GLOD5A6NK44 160 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 C4orf47A7E2U8 309 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 I3L1I5 382 aaPredicted RBP19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 PDPK1O15530 556 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 MED26O95402 600 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 GSNP06396 782 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 NR2F6P10588 404 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 CDKN2CP42773 168 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 EMP3P54852 163 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 ITGA1P56199 1179 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 PIGGQ5H8A4 983 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 PHF19Q5T6S3 580 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 FAM180BQ6P0A1 224 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 PGM2L1Q6PCE3 622 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 OR1L3Q8NH93 324 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 TRIM8Q9BZR9 551 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 FGF21Q9NSA1 209 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 KCMF1Q9P0J7 381 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 PCDHGB4Q9UN71 923 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 PCDHB14Q9Y5E9 798 aa19.31■□□□□ 0.68
VCPKMT-202ENST00000395860 GPR179Q6PRD1 2367 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 A0A1W2PRB8 838 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 H3BMH7 237 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 NVLO15381 856 aaKnown RBP19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 DNAJB6O75190 326 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 RDH16O75452 317 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 CIB2O75838 187 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 TLX1P31314 330 aaPredicted RBP19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 HNRNPFP52597 415 aaKnown RBP19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 FAM214AQ32MH5 1076 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 GTDC1Q4AE62 458 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 TLDC1Q6P9B6 456 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 HPS6Q86YV9 775 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 SLC15A3Q8IY34 581 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 RNF148Q8N7C7 305 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 FAM13CQ8NE31 585 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 OR5T3Q8NGG3 340 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 OR4A15Q8NGL6 344 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 ZNF501Q96CX3 271 aaPredicted RBP19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 ANKRD27Q96NW4 1050 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 ENAMQ9NRM1 1142 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 SLC6A13Q9NSD5 602 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 TAS2R7Q9NYW3 318 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 ABCD2Q9UBJ2 740 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 SLC7A8Q9UHI5 535 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 CLCA2Q9UQC9 943 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 SPTBP11277 2137 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 SCN2AQ99250 2005 aa19.3■□□□□ 0.68
VCPKMT-202ENST00000395860 PGRMC2O15173 223 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 FOXS1O43638 330 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 NSA2O95478 260 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 C6orf47O95873 294 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 ACY1Q03154 408 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 CEACAM7Q14002 265 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 RABL3Q5HYI8 236 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 SAMD4BQ5PRF9 694 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 SLC48A1Q6P1K1 146 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 ZNF621Q6ZSS3 439 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 SLITRK4Q8IW52 837 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 CA13Q8N1Q1 262 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 TMEM125Q96AQ2 219 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 CCDC124Q96CT7 223 aaKnown RBP19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 CUTCQ9NTM9 273 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 SLC25A37Q9NYZ2 338 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 CACNA1HO95180 2353 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 NUP214P35658 2090 aaPredicted RBP19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 TRBV5-3A0A0A0MS03 114 aa19.29■□□□□ 0.68
VCPKMT-202ENST00000395860 AGRPO00253 132 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms